Image super-resolution inspired electron density prediction

Predicting ground-state electron densities of chemical systems has recently received growing attention in machine learning quantum chemistry, given their fundamental importance as highlighted by the Hohenberg-Kohn theorem. Drawing inspiration from the domain of image super-resolution, we view the electron density as a 3D grayscale image and use a convolutional residual network to transform a crude and trivially generated guess of the molecular density into an accurate ground-state quantum mechanical density. Here we show that this model produces more accurate predictions than all prior density prediction approaches. Due to its simplicity, the model is directly applicable to unseen molecular conformations and chemical elements. We show that fine-tuning on limited new data provides high accuracy even in challenging cases of exotic elements and charge states.

Authors

Institutions

Publication Details

Journal
Nature Communications
Published
2025-05-23
DOI
https://doi.org/10.1038/s41467-025-60095-8
Citations
5
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
2.59

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Image super-resolution inspired electron density prediction

Shunyue Yuan, Or Sharir, Garnet Kin‐Lic Chan, Chenghan Li
5 citations
Nature Communications
Machine Learning in Materials Science
2.59
article

Image super-resolution inspired electron density prediction

Shunyue Yuan, Or Sharir, Garnet Kin‐Lic Chan, Chenghan Li
article en
5 citations

Abstract

Predicting ground-state electron densities of chemical systems has recently received growing attention in machine learning quantum chemistry, given their fundamental importance as highlighted by the Hohenberg-Kohn theorem. Drawing inspiration from the domain of image super-resolution, we view the electron density as a 3D grayscale image and use a convolutional residual network to transform a crude and trivially generated guess of the molecular density into an accurate ground-state quantum mechanical density. Here we show that this model produces more accurate predictions than all prior density prediction approaches. Due to its simplicity, the model is directly applicable to unseen molecular conformations and chemical elements. We show that fine-tuning on limited new data provides high accuracy even in challenging cases of exotic elements and charge states.

Nature CommunicationsVol. 16(1)
California Institute of Technology (US)
U.S. Department of Energy, Simons Foundation, Camille and Henry Dreyfus Foundation, California Institute of Technology, Office of Science, Basic Energy Sciences, Chemical Sciences, Geosciences, and Biosciences Division, Los Alamos National Laboratory
Climate action
Openalex Percentile: Top 10%
Machine Learning in Materials Science
2.59
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.