Polychlorinated Biphenyl Exposure Alters tRNA Transcriptome in High-Fat Diet-Fed Mouse Liver
<b>Background/Objectives:</b> Exposure of high-fat diet (HFD)-fed mice to polychlorinated biphenyls (PCBs) results in metabolic dysfunction-associated steatotic liver disease (MASLD) and progression to metabolic dysfunction-associated steatohepatitis (MASH). The mechanisms by which HFD diet and PCBs increase MASLD are unclear. Previously, we identified differences in HFD-fed mouse liver tRNA modifications with single oral exposures to the dioxin-like PCB126, the non-dioxin-like PCB mixture Aroclor 1260 (Ar1260), or the combination of Ar1260 + PCB126. <b>Methods:</b> Here, we used small RNA sequencing and the tRNA analysis of expression (tRAX) pipeline to examine if PCB exposures alter the tRNA transcriptome, including tRNA-derived fragments (tRFs), in the livers of the PCB-exposed mice. <b>Results:</b> Each PCB exposure produced distinct hepatic tRNA transcriptomes with more tRNAs decreased than increased. Only tRNA-Glu-TTC-1 was reduced with all three PCB exposures. More changes in tRFs were identified with Ar1260 alone or in combination with PCB126 than with PCB126 alone. Four tRF-3s were upregulated in both PCB126 and Ar1260 + PCB126 co-exposed mice, suggesting PCB126 as responsible for this increase. We previously reported that PCB126 exposure increased hepatic Angiogenin (ANG) protein which generates tRF-3s. Four previously reported tRNA modifications corresponded to positions of PCB-associated tRNA modifications identified by tRAX: m1A, m6A, ms2t6A, and Ψ. <b>Conclusions:</b> Overall, the differences in hepatic tRNAs and tRFs with three different PCB exposures suggest that PCB exposures play an unexplored role in regulating translation in mouse liver.
Authors
- Julia H. Chariker (ORCID: https://orcid.org/0000-0001-6805-7220)
- Eric C. Rouchka (ORCID: https://orcid.org/0000-0003-3487-6572)
- Kellianne M. Piell (ORCID: https://orcid.org/0000-0002-4132-7304)
- Matthew C. Cave (ORCID: https://orcid.org/0000-0002-2560-6696)
- Belinda J. Petri (ORCID: https://orcid.org/0000-0002-9248-9311)
- Carolyn M. Klinge (ORCID: https://orcid.org/0000-0002-3358-4378)
Institutions
- University of Louisville (US)
Publication Details
- Journal
- Non-Coding RNA
- Published
- 2025-05-22
- DOI
- https://doi.org/10.3390/ncrna11030041
- Primary Topic
- RNA modifications and cancer
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Kentucky Council on Postsecondary Education
- National Institutes of Health