Genome sequence and methylome profile of <i>Natrinema pallidum</i> strain NMX15-1, a halophilic archaeon, from Permian Period halite, Carlsbad, New Mexico

We report the 3.8-Mbp genome sequence of an extreme Haloarchaeon, <i>Natrinema pallidum</i> strain NMX15-1, isolated from 250-million-year-old halite samples of the Permian Period. PacBio's long-read sequencing revealed a genome comprising a chromosome (3.5-Mbp) and three plasmids (203, 71, and 56-Kbp). The proteome is highly acidic and includes 3,784 proteins.

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Journal
Microbiology Resource Announcements
Published
2025-05-20
DOI
https://doi.org/10.1128/mra.01287-24
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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0.00

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article

Genome sequence and methylome profile of Natrinema pallidum strain NMX15-1, a halophilic archaeon, from Permian Period halite, Carlsbad, New Mexico

Priya DasSarma, Shiladitya DasSarma, Dennis W. Powers, Tamas Vincze et al.
Microbiology Resource Announcements
Genomics and Phylogenetic Studies
article

Genome sequence and methylome profile of Natrinema pallidum strain NMX15-1, a halophilic archaeon, from Permian Period halite, Carlsbad, New Mexico

Priya DasSarma, Shiladitya DasSarma, Dennis W. Powers, Tamas Vincze, Alexey Fomenkov, Richard J. Roberts, Aram Khoshnaw, Beatriz Toledo Akiti
article en

Abstract

We report the 3.8-Mbp genome sequence of an extreme Haloarchaeon, <i>Natrinema pallidum</i> strain NMX15-1, isolated from 250-million-year-old halite samples of the Permian Period. PacBio's long-read sequencing revealed a genome comprising a chromosome (3.5-Mbp) and three plasmids (203, 71, and 56-Kbp). The proteome is highly acidic and includes 3,784 proteins.

Microbiology Resource AnnouncementsVol. 14(6)
University of Maryland, Baltimore (US), University System of Maryland (US), University of Mississippi (US), New England Biolabs (China) (CN), Blue Marble Space Institute of Science (US)
National Aeronautics and Space Administration
Life below water
Openalex Percentile: Top 90%
Genomics and Phylogenetic Studies
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