Regulation of tapetum-specific <i>TA29</i> promoter by <i>cis</i> -elements binding positive and negative regulators

The tapetum-specific TA29 promoter from Nicotiana tabacum has been extensively applied for pollination control in hybrid seed production.Despite its widespread use, the elements regulating the tissue-specific activity have not been fully explored.This study conducted in silico and functional analyses to identify and characterize cis-elements within the TA29 Upstream Regulatory Module (URM).Motif discovery tools and a comparative analysis across tapetum/antherexpressed genes were used to identify conserved binding motifs; these corresponded to transcription factors NtMYB12, NtGT-1a, NtNAG1, and NtHD-ZIP.Mutagenesis of these motifs revealed their functional roles: NtMYB12, NtGT-1a, and NtNAG1 act as positive regulators, while NtHD-ZIP acts as a negative regulator of TA29 URM activity.The findings highlight the importance of combinatorial regulation involving both positive and negative transcription factors when modulating the spatial and temporal activity of the TA29 URM.

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Publication Details

Journal
Journal of Plant Biotechnology
Published
2025-05-15
DOI
https://doi.org/10.5010/jpb.2025.52.015.126
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Regulation of tapetum-specific TA29 promoter by cis -elements binding positive and negative regulators

Kamlesh Kumar Soni, Preeti Sharma, Satish Kumar Yadava, Pradeep Kumar Burma et al.
Journal of Plant Biotechnology
Plant Molecular Biology Research
article

Regulation of tapetum-specific TA29 promoter by cis -elements binding positive and negative regulators

Kamlesh Kumar Soni, Preeti Sharma, Satish Kumar Yadava, Pradeep Kumar Burma, Bm Minhajuddin
article en

Abstract

The tapetum-specific TA29 promoter from Nicotiana tabacum has been extensively applied for pollination control in hybrid seed production.Despite its widespread use, the elements regulating the tissue-specific activity have not been fully explored.This study conducted in silico and functional analyses to identify and characterize cis-elements within the TA29 Upstream Regulatory Module (URM).Motif discovery tools and a comparative analysis across tapetum/antherexpressed genes were used to identify conserved binding motifs; these corresponded to transcription factors NtMYB12, NtGT-1a, NtNAG1, and NtHD-ZIP.Mutagenesis of these motifs revealed their functional roles: NtMYB12, NtGT-1a, and NtNAG1 act as positive regulators, while NtHD-ZIP acts as a negative regulator of TA29 URM activity.The findings highlight the importance of combinatorial regulation involving both positive and negative transcription factors when modulating the spatial and temporal activity of the TA29 URM.

Journal of Plant BiotechnologyVol. 52
University of Delhi (IN), Amicable Knowledge Solution University (IN)
Council of Scientific and Industrial Research, India, University of Delhi, Science and Engineering Research Board, Indian Institute Of Petroleum, Council of Scientific and Industrial Research, India
Zero hunger
Openalex Percentile: Top 92%
Plant Molecular Biology Research
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