Token-driven totally asymmetric simple exclusion processes

We consider a family of totally asymmetric simple exclusion processes (TASEPs), consisting of particles on a lattice that require binding by a "token" in various physical configurations to advance over the lattice. Using a combination of theory and simulations, we address the following questions: (i) How does token binding kinetics affect the current-density relation on the lattice? (ii) How does this current-density relation depend on the scarcity of tokens? (iii) How do tokens propagate the effects of the locally imposed disorder (such as a slow site) over the entire lattice? (iv) How does a shared pool of tokens couple concurrent TASEPs running on multiple lattices? and (v) How do our results translate to TASEPs with open boundaries that exchange particles with the reservoir? Since real particle motion (including in biological systems that inspired the standard TASEP model, e.g., protein synthesis or movement of molecular motors) is often catalyzed, regulated, actuated, or otherwise mediated, the token-driven TASEP dynamics analyzed in this paper should allow for a better understanding of real systems and enable a closer match between TASEP theory and experimental observations.

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Publication Details

Journal
Physical review. E
Published
2025-05-19
DOI
https://doi.org/10.1103/physreve.111.054122
Citations
1
Primary Topic
Stochastic processes and statistical mechanics
Type
article
Field-Weighted Citation Impact
3.69

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article

Token-driven totally asymmetric simple exclusion processes

Gašper Tkačik, Bor Kavčič
1 citations
Physical review. E
Stochastic processes and statistical mechanics
3.69
article

Token-driven totally asymmetric simple exclusion processes

Gašper Tkačik, Bor Kavčič
article en
1 citations

Abstract

We consider a family of totally asymmetric simple exclusion processes (TASEPs), consisting of particles on a lattice that require binding by a "token" in various physical configurations to advance over the lattice. Using a combination of theory and simulations, we address the following questions: (i) How does token binding kinetics affect the current-density relation on the lattice? (ii) How does this current-density relation depend on the scarcity of tokens? (iii) How do tokens propagate the effects of the locally imposed disorder (such as a slow site) over the entire lattice? (iv) How does a shared pool of tokens couple concurrent TASEPs running on multiple lattices? and (v) How do our results translate to TASEPs with open boundaries that exchange particles with the reservoir? Since real particle motion (including in biological systems that inspired the standard TASEP model, e.g., protein synthesis or movement of molecular motors) is often catalyzed, regulated, actuated, or otherwise mediated, the token-driven TASEP dynamics analyzed in this paper should allow for a better understanding of real systems and enable a closer match between TASEP theory and experimental observations.

Physical review. EVol. 111(5)
Institute of Science and Technology Austria (AT)
Indian Institute of Technology Gandhinagar
Reduced inequalities
Openalex Percentile: Top 10%
Stochastic processes and statistical mechanics
3.69
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Token-driven totally asymmetric simple exclusion processes — Gašper Tkačik, Bor Kavčič · Physical review. E (2025) | TGRS Research Map | TGRS