The GRAS protein RAM1 interacts with WRI transcription factors to regulate plant genes required for arbuscule development and function

During arbuscular mycorrhiza (AM) symbiosis AM fungi form tree-shaped structures called arbuscules in root cortex cells of host plants. Arbuscules and their host cells are central for reciprocal nutrient exchange between the symbionts. <i>REQUIRED FOR ARBUSCULAR MYCORRHIZATION1</i> (<i>RAM1</i>) encodes a GRAS protein crucial for transcriptionally regulating plant genes needed for arbuscule development and nutrient exchange. Similar to other GRAS proteins, RAM1 likely does not bind to DNA and how RAM1 activates its target promoters remained elusive. Here, we demonstrate that RAM1 interacts with five AM-induced APETALA 2 (AP2) transcription factors of the WRINKLED1-like family called CTTC MOTIF-BINDING TRANSCRIPTION FACTOR1 (CBX1), WRI3, WRI5a, WRI5b, and WRI5c via a C-terminal domain containing the M2/M2a motif. This motif is conserved and enriched in WRI proteins encoded by genomes of AM-competent plants. RAM1 together with any of these WRI proteins activates the promoters of genes required for symbiotic nutrient exchange, namely <i>RAM2</i>, <i>STUNTED ARBUSCULES (STR),</i> and <i>PHOSPHATE TRANSPORTER 4 (PT4)</i>, in <i>Nicotiana benthamiana</i> leaves. This activation as well as target promoter induction in <i>Lotus japonicus</i> hairy roots depends on <i>MYCS</i> (<i>MYCORRHIZA SEQUENCE</i>)-elements and <i>AW</i>-boxes, previously identified as WRI-binding sites. The <i>WRI</i> genes are activated in two waves: Transcription of <i>RAM1</i>, <i>CBX1,</i> and <i>WRI3</i> is coregulated by calcium- and calmodulin-dependent protein kinase-activated CYCLOPS, through the <i>AMCYC-RE</i> in their promoter, and DELLA, while <i>WRI5a</i>, <i>b,</i> and <i>c</i> promoters contain <i>MYCS</i>-elements and <i>AW</i>-boxes and can be activated by RAM1 heterocomplexes with CBX1 or WRI3. We propose that RAM1 provides an activation domain to DNA-binding WRI proteins to activate genes with central roles in AM development and function.

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Journal
Proceedings of the National Academy of Sciences
Published
2025-05-19
DOI
https://doi.org/10.1073/pnas.2427021122
Citations
7
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
Field-Weighted Citation Impact
12.25

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article

The GRAS protein RAM1 interacts with WRI transcription factors to regulate plant genes required for arbuscule development and function

Nitzan Shabek, Priya Pimprikar, Angelica M. Guercio, Michael Paries et al.
7 citations
Proceedings of the National Academy of Sciences
Mycorrhizal Fungi and Plant Interactions
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article

The GRAS protein RAM1 interacts with WRI transcription factors to regulate plant genes required for arbuscule development and function

Nitzan Shabek, Priya Pimprikar, Angelica M. Guercio, Michael Paries, Catarina Cardoso, Karen Hobecker, Franziska Brückner, Yang Si, Filippo Binci, Caroline Gutjahr, Sofía Hernández Luelmo, Annika Usländer, Sagar Bashyal, Lotta Wankner, Philip Troycke
article en
7 citations

Abstract

During arbuscular mycorrhiza (AM) symbiosis AM fungi form tree-shaped structures called arbuscules in root cortex cells of host plants. Arbuscules and their host cells are central for reciprocal nutrient exchange between the symbionts. <i>REQUIRED FOR ARBUSCULAR MYCORRHIZATION1</i> (<i>RAM1</i>) encodes a GRAS protein crucial for transcriptionally regulating plant genes needed for arbuscule development and nutrient exchange. Similar to other GRAS proteins, RAM1 likely does not bind to DNA and how RAM1 activates its target promoters remained elusive. Here, we demonstrate that RAM1 interacts with five AM-induced APETALA 2 (AP2) transcription factors of the WRINKLED1-like family called CTTC MOTIF-BINDING TRANSCRIPTION FACTOR1 (CBX1), WRI3, WRI5a, WRI5b, and WRI5c via a C-terminal domain containing the M2/M2a motif. This motif is conserved and enriched in WRI proteins encoded by genomes of AM-competent plants. RAM1 together with any of these WRI proteins activates the promoters of genes required for symbiotic nutrient exchange, namely <i>RAM2</i>, <i>STUNTED ARBUSCULES (STR),</i> and <i>PHOSPHATE TRANSPORTER 4 (PT4)</i>, in <i>Nicotiana benthamiana</i> leaves. This activation as well as target promoter induction in <i>Lotus japonicus</i> hairy roots depends on <i>MYCS</i> (<i>MYCORRHIZA SEQUENCE</i>)-elements and <i>AW</i>-boxes, previously identified as WRI-binding sites. The <i>WRI</i> genes are activated in two waves: Transcription of <i>RAM1</i>, <i>CBX1,</i> and <i>WRI3</i> is coregulated by calcium- and calmodulin-dependent protein kinase-activated CYCLOPS, through the <i>AMCYC-RE</i> in their promoter, and DELLA, while <i>WRI5a</i>, <i>b,</i> and <i>c</i> promoters contain <i>MYCS</i>-elements and <i>AW</i>-boxes and can be activated by RAM1 heterocomplexes with CBX1 or WRI3. We propose that RAM1 provides an activation domain to DNA-binding WRI proteins to activate genes with central roles in AM development and function.

Proceedings of the National Academy of SciencesVol. 122(21)
Max Planck Institute of Molecular Plant Physiology (DE), Technical University of Munich (DE), Ludwig-Maximilians-Universität München (DE), University of California, Davis (US)
National Science Foundation, U.S. Department of Energy, Alexander von Humboldt-Stiftung, European Commission, Deutsche Forschungsgemeinschaft, Max-Planck-Gesellschaft, Office of Science, Biological and Environmental Research, HORIZON EUROPE European Research Council
Zero hunger
Openalex Percentile: Top 2%
Mycorrhizal Fungi and Plant Interactions
12.25
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