FAIRifying in Intensive Care: From Raw Data to HDF5 with Semantic Annotation and Data Quality Checks

The heterogeneity of formats and quality levels of intensive care data represents a significant challenge for both patient treatment and scientific research. The introduction of a data format that provides unified access and a rich structure of metadata could enhance data analysis in this area. Therefore, a data structure based on HDF5 is proposed, which divides data into smaller segments and extends the metadata with semantic annotation and data quality indicators.

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Publication Details

Journal
Studies in health technology and informatics
Published
2025-05-15
DOI
https://doi.org/10.3233/shti250421
Primary Topic
Scientific Computing and Data Management
Type
article
Field-Weighted Citation Impact
0.00
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article

FAIRifying in Intensive Care: From Raw Data to HDF5 with Semantic Annotation and Data Quality Checks

Martin Dugas, Kei W. Müller, Rosa Klotz, K. Schmitt et al.
Studies in health technology and informatics
Scientific Computing and Data Management
article

FAIRifying in Intensive Care: From Raw Data to HDF5 with Semantic Annotation and Data Quality Checks

Martin Dugas, Kei W. Müller, Rosa Klotz, K. Schmitt, Jonas Biehler, Christian Niklas, Jan Larmann, Markus A. Weigand
article en

Abstract

The heterogeneity of formats and quality levels of intensive care data represents a significant challenge for both patient treatment and scientific research. The introduction of a data format that provides unified access and a rich structure of metadata could enhance data analysis in this area. Therefore, a data structure based on HDF5 is proposed, which divides data into smaller segments and extends the metadata with semantic annotation and data quality indicators.

Studies in health technology and informaticsVol. 327
Heidelberg University (DE), RWTH Aachen University (DE)
Openalex Percentile: Top 73%
Scientific Computing and Data Management
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