Structure of K102 Capsular Polysaccharide from Acinetobacter baumannii KZ-1102 and Its Cleavage by Phage Cato Depolymerase

<i>Acinetobacter baumannii</i> is a significant nosocomial pathogen characterized by the ability to produce a wide variety of capsular polysaccharides (CPSs). The structures of a K102-type CPS isolated from <i>A. baumannii</i> KZ-1102 and its Smith degradation product were determined by sugar analysis, 1D and 2D <sup>1</sup>H NMR spectroscopy, and <sup>13</sup>C NMR spectroscopy. The K102 CPS biosynthesis gene cluster (KL102) contains genes for common sugar synthesis, K unit processing, capsule export, glycosyl transfer, initiating sugar phosphate transfer, and genes that encode d-Glc<i>p</i>NAc/d-Gal<i>p</i>NAc dehydrogenase and phosphoglycerol transferase. The CPS is composed of a pentasaccharide repeating unit (K unit) consisting of a tetrasaccharide backbone including one α-d-Gal<i>p</i>, three α-d-Glc<i>p</i>NAc residues, and one residue of a β-d-Glc<i>p</i> as a side chain. The tailspike depolymerase of the specific <i>Obolenskvirus</i> phage Cato was found to cleave the α-d-Glc<i>p</i>NAc-(1→6)-α-d-Glc<i>p</i>NAc linkage in the K102 CPS to give the monomer and dimer of the K repeating unit, which were characterized by high-resolution electrospray ionization mass spectrometry as well as <sup>1</sup>H and <sup>13</sup>C NMR spectroscopy.

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Journal
International Journal of Molecular Sciences
Published
2025-05-15
DOI
https://doi.org/10.3390/ijms26104727
Citations
1
Primary Topic
Infections and bacterial resistance
Type
article
Field-Weighted Citation Impact
1.80

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article

Structure of K102 Capsular Polysaccharide from Acinetobacter baumannii KZ-1102 and Its Cleavage by Phage Cato Depolymerase

A. V. Perepelov, Eugene Sheck, Anastasiya V. Popova, Anastasia A. Kasimova et al.
1 citations
International Journal of Molecular Sciences
Infections and bacterial resistance
1.80
article

Structure of K102 Capsular Polysaccharide from Acinetobacter baumannii KZ-1102 and Its Cleavage by Phage Cato Depolymerase

A. V. Perepelov, Eugene Sheck, Anastasiya V. Popova, Anastasia A. Kasimova, Мирошников Константин Анатольевич, Andrey Shelenkov, Yuriy A. Knirel, Yulia V. Mikhailova, Ilya Azizov, Mikhail V. Edelstein, Anna M. Shpirt, Ekaterina Gornostal, Mikhail M. Shneider, Alexander S. Shashkov, Nikolay P. Arbatsky
article en
1 citations

Abstract

<i>Acinetobacter baumannii</i> is a significant nosocomial pathogen characterized by the ability to produce a wide variety of capsular polysaccharides (CPSs). The structures of a K102-type CPS isolated from <i>A. baumannii</i> KZ-1102 and its Smith degradation product were determined by sugar analysis, 1D and 2D <sup>1</sup>H NMR spectroscopy, and <sup>13</sup>C NMR spectroscopy. The K102 CPS biosynthesis gene cluster (KL102) contains genes for common sugar synthesis, K unit processing, capsule export, glycosyl transfer, initiating sugar phosphate transfer, and genes that encode d-Glc<i>p</i>NAc/d-Gal<i>p</i>NAc dehydrogenase and phosphoglycerol transferase. The CPS is composed of a pentasaccharide repeating unit (K unit) consisting of a tetrasaccharide backbone including one α-d-Gal<i>p</i>, three α-d-Glc<i>p</i>NAc residues, and one residue of a β-d-Glc<i>p</i> as a side chain. The tailspike depolymerase of the specific <i>Obolenskvirus</i> phage Cato was found to cleave the α-d-Glc<i>p</i>NAc-(1→6)-α-d-Glc<i>p</i>NAc linkage in the K102 CPS to give the monomer and dimer of the K repeating unit, which were characterized by high-resolution electrospray ionization mass spectrometry as well as <sup>1</sup>H and <sup>13</sup>C NMR spectroscopy.

International Journal of Molecular SciencesVol. 26(10)
N.D. Zelinsky Institute of Organic Chemistry (RU), Institute of Bioorganic Chemistry (RU), Central Research Institute of Epidemiology (RU), Smolensk State Medical University (RU), State Research Center for Applied Microbiology and Biotechnology (RU)
Russian Science Foundation
Openalex Percentile: Top 18%
Infections and bacterial resistance
1.80
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