Towards global reaction feasibility and robustness prediction with high throughput data and bayesian deep learning

Predicting organic reaction feasibility and robustness against environmental factors is challenging. We address this issue by integrating high throughput experimentation (HTE) and Bayesian deep learning. Diverging from existing HTE studies focused on niche chemical spaces, in this work, our in-house HTE platform conducted 11,669 distinct acid amine coupling reactions in 156 working hours, yielding the most extensive single HTE dataset at a volumetric scale for industrial delivery. Our Bayesian neural network model achieved a benchmark for prediction accuracy of 89.48% for reaction feasibility. Furthermore, our fine-grained uncertainty disentanglement enables efficient active learning, reducing 80% of data requirements. Additionally, our uncertainty analysis effectively identifies out-of-domain reactions and evaluates reaction robustness or reproducibility against environmental factors for scaling up, offering a practical framework for navigating chemical spaces and designing highly robust industrial processes.

Authors

Institutions

Publication Details

Journal
Nature Communications
Published
2025-05-15
DOI
https://doi.org/10.1038/s41467-025-59812-0
Citations
8
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
4.14
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Towards global reaction feasibility and robustness prediction with high throughput data and bayesian deep learning

Baochen Li, Yuru Liu, Haowen Zhong, Frankie S. Mak et al.
8 citations
Nature Communications
Machine Learning in Materials Science
4.14
article

Towards global reaction feasibility and robustness prediction with high throughput data and bayesian deep learning

Baochen Li, Yuru Liu, Haowen Zhong, Frankie S. Mak, Klement Foo, Sen Lin, Fei Yang, Shuicheng Yan, Xiaoxue Wang, Tianshu Yu, Haibin Sun, Yuqing Huang, Yilan Liu, Peng Wang, Rentao Zhang
article en
8 citations

Abstract

Predicting organic reaction feasibility and robustness against environmental factors is challenging. We address this issue by integrating high throughput experimentation (HTE) and Bayesian deep learning. Diverging from existing HTE studies focused on niche chemical spaces, in this work, our in-house HTE platform conducted 11,669 distinct acid amine coupling reactions in 156 working hours, yielding the most extensive single HTE dataset at a volumetric scale for industrial delivery. Our Bayesian neural network model achieved a benchmark for prediction accuracy of 89.48% for reaction feasibility. Furthermore, our fine-grained uncertainty disentanglement enables efficient active learning, reducing 80% of data requirements. Additionally, our uncertainty analysis effectively identifies out-of-domain reactions and evaluates reaction robustness or reproducibility against environmental factors for scaling up, offering a practical framework for navigating chemical spaces and designing highly robust industrial processes.

Nature CommunicationsVol. 16(1)
Agency for Science, Technology and Research (SG), ShanghaiTech University (CN), Shanghai Light Industry Research Institute (CN), Nagase ChemteX (Japan) (JP), Chinese University of Hong Kong, Shenzhen (CN), Zhejiang Lab (CN), Experimental Drug Development Centre (SG)
Openalex Percentile: Top 6%
Machine Learning in Materials Science
4.14
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.