Structural dynamics and permeability of the TRPV3 pentamer

TRPV3 belongs to the large superfamily of tetrameric transient receptor potential (TRP) ion channels. Recently, using high-speed atomic force microscopy (HS-AFM), we discovered a rare and transient pentameric state for TRPV3 that is in equilibrium with the tetrameric state, and, using cryo-EM, we solved a low-resolution structure of the TRPV3 pentamer, in which, however, many residues were unresolved. Here, we present a higher resolution and more complete structure of the pentamer, revealing a domain-swapped architecture, a collapsed vanilloid binding site, and a large pore. Molecular dynamics simulations and potential of mean force calculations of the pentamer establish high protein dynamics and permeability to large cations. Subunit interface analysis, together with thermal denaturation experiments, led us to propose a molecular mechanism of the tetramer-to-pentamer transition, backed experimentally by HS-AFM observations. Collectively, our data demonstrate that the TRPV3 pentamer is in a hyper-activated state with unique, highly permissive permeation properties.

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Publication Details

Journal
Nature Communications
Published
2025-05-15
DOI
https://doi.org/10.1038/s41467-025-59798-9
Citations
2
Primary Topic
Ion Channels and Receptors
Type
article
Field-Weighted Citation Impact
2.93

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article

Structural dynamics and permeability of the TRPV3 pentamer

Shifra Lansky, Simon Scheuring, Oliver B. Clarke, Zhaokun Wang et al.
2 citations
Nature Communications
Ion Channels and Receptors
2.93
article

Structural dynamics and permeability of the TRPV3 pentamer

Shifra Lansky, Simon Scheuring, Oliver B. Clarke, Zhaokun Wang, Christophe J. Chipot
article en
2 citations

Abstract

TRPV3 belongs to the large superfamily of tetrameric transient receptor potential (TRP) ion channels. Recently, using high-speed atomic force microscopy (HS-AFM), we discovered a rare and transient pentameric state for TRPV3 that is in equilibrium with the tetrameric state, and, using cryo-EM, we solved a low-resolution structure of the TRPV3 pentamer, in which, however, many residues were unresolved. Here, we present a higher resolution and more complete structure of the pentamer, revealing a domain-swapped architecture, a collapsed vanilloid binding site, and a large pore. Molecular dynamics simulations and potential of mean force calculations of the pentamer establish high protein dynamics and permeability to large cations. Subunit interface analysis, together with thermal denaturation experiments, led us to propose a molecular mechanism of the tetramer-to-pentamer transition, backed experimentally by HS-AFM observations. Collectively, our data demonstrate that the TRPV3 pentamer is in a hyper-activated state with unique, highly permissive permeation properties.

Nature CommunicationsVol. 16(1)
Centre National de la Recherche Scientifique (FR), University of Illinois Urbana-Champaign (US), Cornell University (US), Columbia University Irving Medical Center (US), University of Chicago (US), Weill Cornell Medicine (US), Weizmann Institute of Science (IL), Columbia University (US), Université de Lorraine (FR)
Weizmann Institute of Science, National Institutes of Health, National Institute of Neurological Disorders and Stroke, National Center for Complementary and Integrative Health
Openalex Percentile: Top 11%
Ion Channels and Receptors
2.93
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