Improve the Stability and Activity of Antimicrobial Peptides by the Proline-Based PXXP Hinge Structure

Developing a simple and effective strategy to enhance the stability of antimicrobial peptides (AMPs) is critical for successful AMP design. In this study, we leveraged the property of proline to form hinge-like structures and designed a series of repetitive symmetrical sequence AMPs with different proline-based hinge centers (PWWP, PKKP, and PWKP), proposing a template of (KW)<i><sub>n</sub></i>PXXP(WK)<i><sub>n</sub></i>-NH<sub>2</sub> (where XX = WW, <i>n</i> = 1-4 or XX = KK, WK, <i>n</i> = 2-4). The corresponding templates without hinge structures, (KW)<i><sub>n</sub></i>(WK)<i><sub>n</sub></i>-NH<sub>2</sub> (<i>n</i> = 1-4), were used as controls. Through comprehensive evaluations of activity, toxicity, and stability, we identified two promising AMP candidates, (KW)<sub>3</sub>PK and (KW)<sub>3</sub>PWK, which demonstrated excellent antibacterial activity, cell selectivity, and stability. Our findings indicate that incorporating a proline-containing PXXP hinge structure into AMP sequences could serve as an effective strategy to enhance AMP stability.

Authors

Institutions

Publication Details

Journal
Journal of Medicinal Chemistry
Published
2025-05-15
DOI
https://doi.org/10.1021/acs.jmedchem.5c00364
Citations
2
Primary Topic
Antimicrobial Peptides and Activities
Type
article
Field-Weighted Citation Impact
2.37

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Improve the Stability and Activity of Antimicrobial Peptides by the Proline-Based PXXP Hinge Structure

Zufang Ba, Pengyi Yan, Bingqian Ren, Tingting Yang et al.
2 citations
Journal of Medicinal Chemistry
Antimicrobial Peptides and Activities
2.37
article

Improve the Stability and Activity of Antimicrobial Peptides by the Proline-Based PXXP Hinge Structure

Zufang Ba, Pengyi Yan, Bingqian Ren, Tingting Yang, Sanhu Gou, Jingman Ni, Xu Ouyang, Yun Zhang, Yu Wang, Beibei Li, Yao Liu, Chao Zhong, Hui Liu, Yuhuan Zhao, Zhongwei Yu
article en
2 citations

Abstract

Developing a simple and effective strategy to enhance the stability of antimicrobial peptides (AMPs) is critical for successful AMP design. In this study, we leveraged the property of proline to form hinge-like structures and designed a series of repetitive symmetrical sequence AMPs with different proline-based hinge centers (PWWP, PKKP, and PWKP), proposing a template of (KW)<i><sub>n</sub></i>PXXP(WK)<i><sub>n</sub></i>-NH<sub>2</sub> (where XX = WW, <i>n</i> = 1-4 or XX = KK, WK, <i>n</i> = 2-4). The corresponding templates without hinge structures, (KW)<i><sub>n</sub></i>(WK)<i><sub>n</sub></i>-NH<sub>2</sub> (<i>n</i> = 1-4), were used as controls. Through comprehensive evaluations of activity, toxicity, and stability, we identified two promising AMP candidates, (KW)<sub>3</sub>PK and (KW)<sub>3</sub>PWK, which demonstrated excellent antibacterial activity, cell selectivity, and stability. Our findings indicate that incorporating a proline-containing PXXP hinge structure into AMP sequences could serve as an effective strategy to enhance AMP stability.

Journal of Medicinal ChemistryVol. 68(11)
Macau University of Science and Technology (MO), Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Lanzhou University (CN)
Lanzhou University, National Natural Science Foundation of China, Chinese Academy of Medical Sciences, Program for Changjiang Scholars and Innovative Research Team in University
Affordable and clean energy
Openalex Percentile: Top 12%
Antimicrobial Peptides and Activities
2.37
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.