Hybrid Deep Learning for Survival Prediction in Brain Metastases Using Multimodal MRI and Clinical Data
<b>Background:</b> Survival prediction in patients with brain metastases remains a major clinical challenge, where timely and individualized prognostic estimates are critical for guiding treatment strategies and patient counseling. <b>Methods:</b> We propose a novel hybrid deep learning framework that integrates volumetric MRI-derived imaging biomarkers with structured clinical and demographic data to predict overall survival time. Our dataset includes 148 patients from three institutions, featuring expert-annotated segmentations of enhancing tumors, necrosis, and peritumoral edema. Two convolutional neural network backbones-ResNet-50 and EfficientNet-B0-were fused with fully connected layers processing tabular data. Models were trained using mean squared error loss and evaluated through stratified cross-validation and an independent held-out test set. <b>Results:</b> The hybrid model based on EfficientNet-B0 achieved state-of-the-art performance, attaining an R<sup>2</sup> score of 0.970 and a mean absolute error of 3.05 days on the test set. Permutation feature importance highlighted edema-to-tumor ratio and enhancing tumor volume as the most informative predictors. Grad-CAM visualizations confirmed the model's attention to anatomically and clinically relevant regions. Performance consistency across validation folds confirmed the framework's robustness and generalizability. <b>Conclusions:</b> This study demonstrates that multimodal deep learning can deliver accurate, explainable, and clinically actionable survival predictions in brain metastases. The proposed framework offers a promising foundation for integration into real-world oncology workflows to support personalized prognosis and informed therapeutic decision-making.
Authors
- Diana-Ioana Boboc
- Maricel Agop (ORCID: https://orcid.org/0000-0003-2293-5803)
- Simona Ruxandra Volovăț (ORCID: https://orcid.org/0000-0001-7084-6333)
- Ștefan Lucian Burlea
- Lăcrămioara Ochiuz (ORCID: https://orcid.org/0000-0001-6447-0958)
- Călin Gheorghe Buzea (ORCID: https://orcid.org/0000-0003-2791-3400)
- Dragoș Ioan Rusu (ORCID: https://orcid.org/0000-0002-5485-0620)
- Cristian Constantin Volovăț
- Mădălina-Raluca Ostafe
- Dragoș Teodor Iancu
- Laurențiu Bujor
Institutions
- Grigore T. Popa University of Medicine and Pharmacy (RO)
- Gheorghe Asachi Technical University of Iași (RO)
- University of Bacău (RO)
- National Institute of Research and Development for Technical Physics (RO)
Publication Details
- Journal
- Diagnostics
- Published
- 2025-05-14
- DOI
- https://doi.org/10.3390/diagnostics15101242
- Citations
- 3
- Primary Topic
- Brain Metastases and Treatment
- Type
- article
- Field-Weighted Citation Impact
- 4.56