Integrating Bulk and Single-Cell Transcriptomics with Machine Learning Reveals a Heme Metabolism-Based Panel for Lung Adenocarcinoma Chemotherapy Resistance
Lung adenocarcinoma (LUAD) is a leading cause of cancer-related mortality, with heme metabolism playing a critical role in tumor progression and treatment resistance. This study investigates the clinical implications of heme metabolism in LUAD, focusing on its link to ferroptosis and drug sensitivity. Using multi-omics data from TCGA-LUAD, GEO databases, and a single-cell RNA-seq cohort, we identified two molecular subtypes based on heme metabolism-related genes. We further developed a prognostic panel, termed the heme metabolism risk score (HMRS), using LASSO and multivariate Cox regression analyses. The HMRS panel effectively stratified patients into high- and low-risk groups, with high-risk patients showing enhanced tumor proliferation, suppressed ferroptosis, and resistance to chemotherapy. Single-cell analysis revealed elevated heme metabolism risk in epithelial cells correlated with tumor progression. Drug sensitivity predictions were validated in platinum-based chemotherapy cohorts, confirming HMRS as a robust prognostic tool. ABCC2 was identified as a key regulator of ferroptosis and cisplatin resistance, with in vitro experiments demonstrating that ABCC2 knockdown enhanced cisplatin-induced ferroptosis. These findings highlight HMRS as a critical tool for patient stratification and ABCC2 as a promising therapeutic target to overcome cisplatin resistance.
Authors
- Wei Zhao (ORCID: https://orcid.org/0000-0001-6732-9466)
- Tongyang Gong (ORCID: https://orcid.org/0000-0002-1154-931X)
- Bufan Xiao
- Nan Wu (ORCID: https://orcid.org/0000-0002-3531-1656)
- Haibo Han (ORCID: https://orcid.org/0000-0003-2240-5546)
- Shuchang Liu (ORCID: https://orcid.org/0000-0002-1440-911X)
- Xuantong Zhou (ORCID: https://orcid.org/0009-0000-3597-5404)
- Lin Zhao
- Yuge Zhu
Institutions
- Peking University (CN)
- Peking University Cancer Hospital (CN)
- State Key Laboratory of Molecular Oncology
Publication Details
- Journal
- International Journal of Molecular Sciences
- Published
- 2025-05-14
- DOI
- https://doi.org/10.3390/ijms26104685
- Citations
- 3
- Primary Topic
- Ferroptosis and cancer prognosis
- Type
- article
- Field-Weighted Citation Impact
- 4.56
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Beijing Municipality
- National Key Research and Development Program of China