Multi-target property prediction and optimization using latent spaces of generative model

Abstract Multi-target property prediction has the potential to improve generalization by exploiting the positive transfer between targets. Molecular generative models utilize independent single-target property prediction networks to discover novel molecules. We propose using multi-target networks to jointly predict several molecular properties and learn better representations by exploiting auxiliary information. Our multi-target model shows improvement in prediction accuracy on the test set. We additionally present results demonstrating promising performance in property prediction in these generative models does not translate to optimization. More specifically, random exploration is competitive with gradient-based strategies and better methods are needed.

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Publication Details

Journal
Machine Learning Science and Technology
Published
2025-05-14
DOI
https://doi.org/10.1088/2632-2153/add8e0
Primary Topic
Neural Networks and Applications
Type
article
Field-Weighted Citation Impact
0.00

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Multi-target property prediction and optimization using latent spaces of generative model

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Multi-target property prediction and optimization using latent spaces of generative model

Heikki Käsnänen, Samuel Kaski, Markus Heinonen, Aadish Kumar Jain, Julius Sipilä
article en

Abstract

Abstract Multi-target property prediction has the potential to improve generalization by exploiting the positive transfer between targets. Molecular generative models utilize independent single-target property prediction networks to discover novel molecules. We propose using multi-target networks to jointly predict several molecular properties and learn better representations by exploiting auxiliary information. Our multi-target model shows improvement in prediction accuracy on the test set. We additionally present results demonstrating promising performance in property prediction in these generative models does not translate to optimization. More specifically, random exploration is competitive with gradient-based strategies and better methods are needed.

Machine Learning Science and TechnologyVol. 6(2)
University of Manchester (GB), Orion Corporation (Finland) (FI), Aalto University (FI)
Business Finland, Engineering and Physical Sciences Research Council, Strategic Research Council
Openalex Percentile: Top 95%
Neural Networks and Applications
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