Efficient CMR Report Classification Through Synthetic Data Distillation and Metadata Fusion

This study presents a ClinicalBERT model specialized for cardiovascular MR (CMR) report classification through synthetic data-driven knowledge distillation and metadata integration. To enable efficient and accurate classification of CMR reports, we generated 20,000 synthetic reports using a large language model, transferring nuanced medical knowledge to Clinical-BERT while minimizing computational costs. Metadata integration further enhanced classification specificity for target diseases, with mixed results observed for negation filtering. Our optimized model achieved a 50% performance improvement over the baseline, demonstrating synthetic data's potential for training specialized NLP models in clinical applications. This work establishes a framework for efficient, deployable CMR classification models in dataset creation, cleaning, and auditing. All relevant source code can be found at our GitHub repository: https://github.com/PRMA-PRMA/HeartScan_Classifier

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Published
2025-04-14
DOI
https://doi.org/10.1109/isbi60581.2025.10980946
Primary Topic
Reservoir Engineering and Simulation Methods
Type
article
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Efficient CMR Report Classification Through Synthetic Data Distillation and Metadata Fusion

Christopher Crabtree, Orlando P. Simonetti, Yuan Xue, Matthew Tong et al.
Reservoir Engineering and Simulation Methods
article

Efficient CMR Report Classification Through Synthetic Data Distillation and Metadata Fusion

Christopher Crabtree, Orlando P. Simonetti, Yuan Xue, Matthew Tong, Parker Martin
article en

Abstract

This study presents a ClinicalBERT model specialized for cardiovascular MR (CMR) report classification through synthetic data-driven knowledge distillation and metadata integration. To enable efficient and accurate classification of CMR reports, we generated 20,000 synthetic reports using a large language model, transferring nuanced medical knowledge to Clinical-BERT while minimizing computational costs. Metadata integration further enhanced classification specificity for target diseases, with mixed results observed for negation filtering. Our optimized model achieved a 50% performance improvement over the baseline, demonstrating synthetic data's potential for training specialized NLP models in clinical applications. This work establishes a framework for efficient, deployable CMR classification models in dataset creation, cleaning, and auditing. All relevant source code can be found at our GitHub repository: https://github.com/PRMA-PRMA/HeartScan_Classifier

The Ohio State University (US)
Openalex Percentile: Top 87%
Reservoir Engineering and Simulation Methods
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