Multimodal Weakly Supervised Segmentation for Histopathology

Weakly-supervised tissue segmentation methods usually generate masks using Class Activation Maps (CAMs) based on image labels but often highlight only the most discriminative regions. Some approaches have attempted to improve the segmentation performance by incorporating textual knowledge from morphological descriptions. However, since detailed text annotations for each image are costly, such methods have used generic domain knowledge which can contain information irrelevant to the individual images. To address this, we propose a token-based method that selectively learns words most relevant to the segmentation objects while ignoring irrelevant text. We divide the image into patches and use CLIP's image-text matching capability to compute the similarity between each patch and all text labels, generating a coarse segmentation mask. In order to narrow the gap between patch-level and image-level, we further consider the correspondence between the segmentation object and text labels from a global perspective and incorporate it as part of the loss function. This method outperforms all benchmarked approaches on the LUAD-HistoSeg and BCSS-WSSS datasets.

Authors

Institutions

Publication Details

Published
2025-04-14
DOI
https://doi.org/10.1109/isbi60581.2025.10980775
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Multimodal Weakly Supervised Segmentation for Histopathology

Matthew A. B. Baker, Maurice Pagnucco, Yang Song, Sicong Gao
AI in cancer detection
article

Multimodal Weakly Supervised Segmentation for Histopathology

Matthew A. B. Baker, Maurice Pagnucco, Yang Song, Sicong Gao
article en

Abstract

Weakly-supervised tissue segmentation methods usually generate masks using Class Activation Maps (CAMs) based on image labels but often highlight only the most discriminative regions. Some approaches have attempted to improve the segmentation performance by incorporating textual knowledge from morphological descriptions. However, since detailed text annotations for each image are costly, such methods have used generic domain knowledge which can contain information irrelevant to the individual images. To address this, we propose a token-based method that selectively learns words most relevant to the segmentation objects while ignoring irrelevant text. We divide the image into patches and use CLIP's image-text matching capability to compute the similarity between each patch and all text labels, generating a coarse segmentation mask. In order to narrow the gap between patch-level and image-level, we further consider the correspondence between the segmentation object and text labels from a global perspective and incorporate it as part of the loss function. This method outperforms all benchmarked approaches on the LUAD-HistoSeg and BCSS-WSSS datasets.

UNSW Sydney (AU)
Openalex Percentile: Top 95%
AI in cancer detection
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.