Exploring Foundation Models Fine-Tuning for Cytology Classification

Cytology slides are essential tools in diagnosing and staging cancer, but their analysis is time-consuming and costly. Foundation models have shown great potential to assist in these tasks. In this paper, we explore how existing foundation models can be applied to cytological classification. More particularly, we focus on low-rank adaptation, a parameter-efficient fine-tuning method suited to few-shot learning. We evaluated five foundation models across four cytological classification datasets. Our results demonstrate that fine-tuning the pre-trained backbones with low-rank adaptation significantly improves model performance compared to fine-tuning only the classifier head, achieving state-of-the-art results on both simple and complex classification tasks while requiring fewer data samples. Our source code is available on GitHub https://github.com/mdausort/Cytology-fine-tuning.

Authors

Institutions

Publication Details

Published
2025-04-14
DOI
https://doi.org/10.1109/isbi60581.2025.10981249
Citations
3
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
7.44

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Exploring Foundation Models Fine-Tuning for Cytology Classification

Karim El Khoury, Maxime Zanella, Isabelle Salmon, Tiffanie Godelaine et al.
3 citations
AI in cancer detection
7.44
article

Exploring Foundation Models Fine-Tuning for Cytology Classification

Karim El Khoury, Maxime Zanella, Isabelle Salmon, Tiffanie Godelaine, Manon Dausort, Benoît Macq
article en
3 citations

Abstract

Cytology slides are essential tools in diagnosing and staging cancer, but their analysis is time-consuming and costly. Foundation models have shown great potential to assist in these tasks. In this paper, we explore how existing foundation models can be applied to cytological classification. More particularly, we focus on low-rank adaptation, a parameter-efficient fine-tuning method suited to few-shot learning. We evaluated five foundation models across four cytological classification datasets. Our results demonstrate that fine-tuning the pre-trained backbones with low-rank adaptation significantly improves model performance compared to fine-tuning only the classifier head, achieving state-of-the-art results on both simple and complex classification tasks while requiring fewer data samples. Our source code is available on GitHub https://github.com/mdausort/Cytology-fine-tuning.

Université Libre de Bruxelles (BE), UCLouvain (BE)
Federación Española de Enfermedades Raras
Openalex Percentile: Top 3%
AI in cancer detection
7.44
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.