Identification of DNA-binding with one finger (DOF) transcription factor family and functional study of CsDOF10 in sweet orange (<i>Citrus sinensis</i>)

DOF transcription factors (TFs), which are specific to plants and contain zinc finger motifs, play a crucial role in various physiological and biochemical processes throughout plant life. Citrus sweet orange, one of the most economically and aesthetically valuable fruit crops globally, has not been the subject of thorough systematic analyses regarding its <italic>CsDOF</italic> gene members and their functions. In this study, we identified 24 <italic>CsDOF</italic> genes that are distributed unevenly across 19 scaffolds in sweet orange. We provide a detailed overview of these <italic>CsDOF</italic> genes, including their scaffold locations, phylogenetic relationships with the Arabidopsis DOF family, and structural characteristics. The phylogenetic analysis grouped the 60 DOF members identified from citrus and Arabidopsis into six main groups. Additionally, we detected distinct expression patterns of <italic>CsDOF</italic> genes under both normal and drought conditions using qRT-qPCR. Notably, the <italic>CsDOF10</italic> gene showed high expression level in response to drought treatment, suggesting a potential adaptation to drought stress. The overexpression of <italic>CsDOF10</italic> in Arabidopsis increases the plant's resistance to drought, stimulates the growth of primary roots, and suppresses the formation of lateral roots. CsDOF10 is located in the nucleus and has transcriptional activation activity. Moreover, additional studies have demonstrated that the expression of <italic>CsDOF10</italic> is influenced by the upstream regulatory factor CsKNOX9. Our discoveries offer significant insights for future investigations into the ability of citrus sweet orange to cope with drought stress.

Authors

Institutions

Publication Details

Journal
Fruit Research
Published
2025-01-01
DOI
https://doi.org/10.48130/frures-0025-0011
Citations
3
Primary Topic
Plant Gene Expression Analysis
Type
article
Field-Weighted Citation Impact
2.42
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Identification of DNA-binding with one finger (DOF) transcription factor family and functional study of CsDOF10 in sweet orange (Citrus sinensis)

Yuhan Sun, Ren‐Fang Zeng, Yu Qi, Si‐Fan Hu et al.
3 citations
Fruit Research
Plant Gene Expression Analysis
2.42
article

Identification of DNA-binding with one finger (DOF) transcription factor family and functional study of CsDOF10 in sweet orange (Citrus sinensis)

Yuhan Sun, Ren‐Fang Zeng, Yu Qi, Si‐Fan Hu, Zhi-Qun Zhong
article en
3 citations

Abstract

DOF transcription factors (TFs), which are specific to plants and contain zinc finger motifs, play a crucial role in various physiological and biochemical processes throughout plant life. Citrus sweet orange, one of the most economically and aesthetically valuable fruit crops globally, has not been the subject of thorough systematic analyses regarding its <italic>CsDOF</italic> gene members and their functions. In this study, we identified 24 <italic>CsDOF</italic> genes that are distributed unevenly across 19 scaffolds in sweet orange. We provide a detailed overview of these <italic>CsDOF</italic> genes, including their scaffold locations, phylogenetic relationships with the Arabidopsis DOF family, and structural characteristics. The phylogenetic analysis grouped the 60 DOF members identified from citrus and Arabidopsis into six main groups. Additionally, we detected distinct expression patterns of <italic>CsDOF</italic> genes under both normal and drought conditions using qRT-qPCR. Notably, the <italic>CsDOF10</italic> gene showed high expression level in response to drought treatment, suggesting a potential adaptation to drought stress. The overexpression of <italic>CsDOF10</italic> in Arabidopsis increases the plant's resistance to drought, stimulates the growth of primary roots, and suppresses the formation of lateral roots. CsDOF10 is located in the nucleus and has transcriptional activation activity. Moreover, additional studies have demonstrated that the expression of <italic>CsDOF10</italic> is influenced by the upstream regulatory factor CsKNOX9. Our discoveries offer significant insights for future investigations into the ability of citrus sweet orange to cope with drought stress.

Fruit ResearchVol. 5(1)
South China Agricultural University (CN), Guangzhou Academy of Building Research (China) (CN), Guangdong Academy of Agricultural Sciences (CN)
Zero hunger
Openalex Percentile: Top 12%
Plant Gene Expression Analysis
2.42
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.