Computational modeling and dynamical analysis for B. subtilis competence genic regulation circuit with multiple time delays and external noisy regulation
Bacillus subtilis (B. subtilis), a bacterium known to enter a competent state spontaneously, has garnered significant attention due to its intricate internal regulatory mechanisms. This study proposes a six-dimensional continuous delay differential equation (DDE) model incorporating two-time delays and a stochastic model that accounts for noise, aimed at delving deeper into the dynamic behaviors of the B. subtilis competence gene regulation circuit. Our investigation reveals that time delays play a crucial role in inducing oscillatory behavior within the continuous DDE model. Analyzing the dynamics of multiple time delays proves to be more intricate than studying a single delay. Furthermore, certain parameter adjustments significantly influence the system's dynamic characteristics. The introduction of noise also triggers oscillations, with the irregular oscillation patterns closely aligning with real-world observations. Intriguingly, the effects of parameters and noise regulation undergo significant changes when time delays are jointly considered. This analysis offers a fresh perspective on understanding B. subtilis competence and provides essential theoretical support for subsequent experimental endeavors in this domain of biomathematics.
Authors
- Fang Yan (ORCID: https://orcid.org/0000-0001-6624-9720)
- Na Zhao (ORCID: https://orcid.org/0000-0002-7312-6355)
- Haihong Liu (ORCID: https://orcid.org/0000-0002-2666-7933)
Institutions
- Yunnan Normal University (CN)
- South China University of Technology (CN)
Publication Details
- Journal
- Journal of Bioinformatics and Computational Biology
- Published
- 2025-04-01
- DOI
- https://doi.org/10.1142/s0219720025500052
- Primary Topic
- Gene Regulatory Network Analysis
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China