New 9 <i>H</i> ‐pyrido[2,3‐ <i>b</i> ]Indoles, Synthesis, Photophysical/Theoretical Studies, and Application as the Fluorescence Probes
Using the "1,2,4-triazine" methodology, we have designed a series of new 9H-pyrido[2,3-b]indole-based fluorophores/probes 4a-e, 7a,b, and 8a,b. Photophysical studies of the push-pull fluorophores 8a and 8b revealed a positive solvatochromic effect with Δμ > 15D and Stokes shifts of up to 270 nm. Experimental data and theoretical calculations of the ground and excited states of the compounds demonstrated that pyridoindoles 4a-e and 7a,b exhibit a planarized intramolecular charge-transfer (PLICT) state, which is accompanied by a gradual increase in luminescence quantum yield for samples 4d and 7b with increasing solvent polarity. Probe 4b, characterized by an acid dissociation constant (pK<sub>a</sub>) of 5.5, showed high sensitivity to local pH changes in the microenvironment. A "turn-off" acidochromic response was observed for 4d and 8a with Stern-Volmer quenching constants of 1.6 × 10<sup>3</sup> and 5.5 × 10<sup>3</sup> M<sup>-1</sup>, respectively, while a "turn-off-on" response was detected for 4b and 8b during titration with TFA. Fluorescence and UV-vis absorption spectroscopy studies of the interaction between probe 4b and calf thymus DNA (ctDNA) confirmed a static quenching mechanism with the formation of 4b-ctDNA complex, indicating that the probe binds to the DNA helix via a groove binding mode. These findings highlight the potential of this pyridoindoles for visual detection and cellular imaging applications.
Authors
- В. С. Гавико (ORCID: https://orcid.org/0000-0002-9841-9293)
- Dmitry S. Kopchuk (ORCID: https://orcid.org/0000-0002-0397-4033)
- Tatyana N. Moshkina (ORCID: https://orcid.org/0000-0003-4131-3196)
- Мaria I. Valieva (ORCID: https://orcid.org/0000-0001-5965-1527)
- А. В. Рыбакова (ORCID: https://orcid.org/0000-0002-0232-4776)
- Grigory V. Zyryanov (ORCID: https://orcid.org/0000-0002-9692-2346)
- E. A. Kudryashova (ORCID: https://orcid.org/0000-0002-7031-5230)
- Alexander S. Novikov (ORCID: https://orcid.org/0000-0001-9913-5324)
- Olga S. Taniya (ORCID: https://orcid.org/0000-0001-9434-6835)
- Ya. K. Shtaitz (ORCID: https://orcid.org/0000-0002-4786-5568)
- Svetlana S. Potapova
- Yuliya M. Sayfutdinova
Institutions
- South Ural State University (RU)
- Peoples' Friendship University of Russia (RU)
- Ural Federal University (RU)
- Russian Academy of Sciences (RU)
- St Petersburg University (RU)
- M.N. Mikheev Institute of Metal Physics (RU)
- Institute of Organic Synthesis (RU)
Publication Details
- Journal
- Chemistry - An Asian Journal
- Published
- 2025-05-09
- DOI
- https://doi.org/10.1002/asia.202500573
- Citations
- 1
- Primary Topic
- DNA and Nucleic Acid Chemistry
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Russian Science Foundation
- RUDN University