New 9 <i>H</i> ‐pyrido[2,3‐ <i>b</i> ]Indoles, Synthesis, Photophysical/Theoretical Studies, and Application as the Fluorescence Probes

Using the "1,2,4-triazine" methodology, we have designed a series of new 9H-pyrido[2,3-b]indole-based fluorophores/probes 4a-e, 7a,b, and 8a,b. Photophysical studies of the push-pull fluorophores 8a and 8b revealed a positive solvatochromic effect with Δμ > 15D and Stokes shifts of up to 270 nm. Experimental data and theoretical calculations of the ground and excited states of the compounds demonstrated that pyridoindoles 4a-e and 7a,b exhibit a planarized intramolecular charge-transfer (PLICT) state, which is accompanied by a gradual increase in luminescence quantum yield for samples 4d and 7b with increasing solvent polarity. Probe 4b, characterized by an acid dissociation constant (pK<sub>a</sub>) of 5.5, showed high sensitivity to local pH changes in the microenvironment. A "turn-off" acidochromic response was observed for 4d and 8a with Stern-Volmer quenching constants of 1.6 × 10<sup>3</sup> and 5.5 × 10<sup>3</sup> M<sup>-1</sup>, respectively, while a "turn-off-on" response was detected for 4b and 8b during titration with TFA. Fluorescence and UV-vis absorption spectroscopy studies of the interaction between probe 4b and calf thymus DNA (ctDNA) confirmed a static quenching mechanism with the formation of 4b-ctDNA complex, indicating that the probe binds to the DNA helix via a groove binding mode. These findings highlight the potential of this pyridoindoles for visual detection and cellular imaging applications.

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Publication Details

Journal
Chemistry - An Asian Journal
Published
2025-05-09
DOI
https://doi.org/10.1002/asia.202500573
Citations
1
Primary Topic
DNA and Nucleic Acid Chemistry
Type
article
Field-Weighted Citation Impact
0.81

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article

New 9 H ‐pyrido[2,3‐ b ]Indoles, Synthesis, Photophysical/Theoretical Studies, and Application as the Fluorescence Probes

В. С. Гавико, Dmitry S. Kopchuk, Tatyana N. Moshkina, Мaria I. Valieva et al.
1 citations
Chemistry - An Asian Journal
DNA and Nucleic Acid Chemistry
0.81
article

New 9 H ‐pyrido[2,3‐ b ]Indoles, Synthesis, Photophysical/Theoretical Studies, and Application as the Fluorescence Probes

В. С. Гавико, Dmitry S. Kopchuk, Tatyana N. Moshkina, Мaria I. Valieva, А. В. Рыбакова, Grigory V. Zyryanov, E. A. Kudryashova, Alexander S. Novikov, Olga S. Taniya, Ya. K. Shtaitz, Svetlana S. Potapova, Yuliya M. Sayfutdinova
article en
1 citations

Abstract

Using the "1,2,4-triazine" methodology, we have designed a series of new 9H-pyrido[2,3-b]indole-based fluorophores/probes 4a-e, 7a,b, and 8a,b. Photophysical studies of the push-pull fluorophores 8a and 8b revealed a positive solvatochromic effect with Δμ > 15D and Stokes shifts of up to 270 nm. Experimental data and theoretical calculations of the ground and excited states of the compounds demonstrated that pyridoindoles 4a-e and 7a,b exhibit a planarized intramolecular charge-transfer (PLICT) state, which is accompanied by a gradual increase in luminescence quantum yield for samples 4d and 7b with increasing solvent polarity. Probe 4b, characterized by an acid dissociation constant (pK<sub>a</sub>) of 5.5, showed high sensitivity to local pH changes in the microenvironment. A "turn-off" acidochromic response was observed for 4d and 8a with Stern-Volmer quenching constants of 1.6 × 10<sup>3</sup> and 5.5 × 10<sup>3</sup> M<sup>-1</sup>, respectively, while a "turn-off-on" response was detected for 4b and 8b during titration with TFA. Fluorescence and UV-vis absorption spectroscopy studies of the interaction between probe 4b and calf thymus DNA (ctDNA) confirmed a static quenching mechanism with the formation of 4b-ctDNA complex, indicating that the probe binds to the DNA helix via a groove binding mode. These findings highlight the potential of this pyridoindoles for visual detection and cellular imaging applications.

Chemistry - An Asian JournalVol. 20(14)
South Ural State University (RU), Peoples' Friendship University of Russia (RU), Ural Federal University (RU), Russian Academy of Sciences (RU), St Petersburg University (RU), M.N. Mikheev Institute of Metal Physics (RU), Institute of Organic Synthesis (RU)
Russian Science Foundation, RUDN University
Clean water and sanitation
Openalex Percentile: Top 28%
DNA and Nucleic Acid Chemistry
0.81
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