Complete genome sequence of Enterococcus faecium strain GB_C_05 with potential characteristics applicable as a bacteriocin-producing probiotic feed additive

The whole genome of <italic>Enterococcus faecium</italic> GB_C_05, a strain isolated from Sikhye, a traditional Korean rice beverage, was successfully sequenced and analyzed using Oxford Nanopore Technologies. The complete genome sequence of GB_C_05 contains a circular chromosome with a total length of 2,575,440 base pairs (bp) and a guanine + cytosine (GC) content of 38.2%, along with one circular plasmid, which has a length of 230,283 bp and a GC content of 35.2%. Annotation of the GB_C_05 genome revealed 2,756 protein-coding sequences (CDSs), 70 tRNAs, and 18 rRNAs on the chromosome. Notably, CDSs related to bacteriocin synthesis (Enterocin) and carbohydrate metabolism (α-galactosidase, β-glucosidase and α-L-arabinofuranosidase), as well as genes potentially involved in probiotic-associated functions such as adhesion and colonization, were identified. This comprehensive study presents the complete genome sequence of <italic>Enterococcus faecium</italic> GB_C_05, providing insight into the diverse additives utilized in animal farming to enhance nutritional quality and livestock productivity.

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Publication Details

Journal
Journal of Animal Science and Technology
Published
2025-04-23
DOI
https://doi.org/10.5187/jast.2025.e40
Citations
2
Primary Topic
Probiotics and Fermented Foods
Type
article
Field-Weighted Citation Impact
2.32

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article

Complete genome sequence of Enterococcus faecium strain GB_C_05 with potential characteristics applicable as a bacteriocin-producing probiotic feed additive

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article

Complete genome sequence of Enterococcus faecium strain GB_C_05 with potential characteristics applicable as a bacteriocin-producing probiotic feed additive

Yeongjae Chae, Hyunok Doo, Gi Beom Keum, Eun Sol Kim, Ju-Hoon Lee, Yejin Choi, Jinok Kwak, Sheena Kim, Hyeun Bum Kim, Haram Kim, Juyoun Kang
article en
2 citations

Abstract

The whole genome of <italic>Enterococcus faecium</italic> GB_C_05, a strain isolated from Sikhye, a traditional Korean rice beverage, was successfully sequenced and analyzed using Oxford Nanopore Technologies. The complete genome sequence of GB_C_05 contains a circular chromosome with a total length of 2,575,440 base pairs (bp) and a guanine + cytosine (GC) content of 38.2%, along with one circular plasmid, which has a length of 230,283 bp and a GC content of 35.2%. Annotation of the GB_C_05 genome revealed 2,756 protein-coding sequences (CDSs), 70 tRNAs, and 18 rRNAs on the chromosome. Notably, CDSs related to bacteriocin synthesis (Enterocin) and carbohydrate metabolism (α-galactosidase, β-glucosidase and α-L-arabinofuranosidase), as well as genes potentially involved in probiotic-associated functions such as adhesion and colonization, were identified. This comprehensive study presents the complete genome sequence of <italic>Enterococcus faecium</italic> GB_C_05, providing insight into the diverse additives utilized in animal farming to enhance nutritional quality and livestock productivity.

Journal of Animal Science and Technology
Ministry of Food and Drug Safety
Zero hunger
Openalex Percentile: Top 13%
Probiotics and Fermented Foods
2.32
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