To a mechanical model of synthetic catch-bonds

Abstract We support a preliminary determination of the catch-bond character of a mechanical–chemical toy model using a tweezers construction with some modifications. We discuss a theoretical analysis of the problem using Newton trajectories. We propose a two-dimensional potential energy surfaces for this model. We discuss the slip, ideal and catch-bonds for this model using the previous potential parts of Dansuk and Keten (Matter 1:911, 2019). Chemical examples of the ansatz are allosteric reactions, especially FimH proteins. We note again that Newton trajectories provide the theoretical background of mechanochemistry. Construction of a potential energy surface and use of Newton trajectories by Wolfram Mathematica. Calculation of real catch bond behavior. We get for a tweezers model the catch bond behavior. Graphical abstract Two barriers under external force, F. The catch-bond barrier increases.

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Publication Details

Journal
Journal of Mathematical Chemistry
Published
2025-05-08
DOI
https://doi.org/10.1007/s10910-025-01731-y
Primary Topic
Force Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

To a mechanical model of synthetic catch-bonds

Sinan Keten, Kerim C. Dansuk, Josep María Bofill, Wolfgang Quapp
Journal of Mathematical Chemistry
Force Microscopy Techniques and Applications
article

To a mechanical model of synthetic catch-bonds

Sinan Keten, Kerim C. Dansuk, Josep María Bofill, Wolfgang Quapp
article en

Abstract

Abstract We support a preliminary determination of the catch-bond character of a mechanical–chemical toy model using a tweezers construction with some modifications. We discuss a theoretical analysis of the problem using Newton trajectories. We propose a two-dimensional potential energy surfaces for this model. We discuss the slip, ideal and catch-bonds for this model using the previous potential parts of Dansuk and Keten (Matter 1:911, 2019). Chemical examples of the ansatz are allosteric reactions, especially FimH proteins. We note again that Newton trajectories provide the theoretical background of mechanochemistry. Construction of a potential energy surface and use of Newton trajectories by Wolfram Mathematica. Calculation of real catch bond behavior. We get for a tweezers model the catch bond behavior. Graphical abstract Two barriers under external force, F. The catch-bond barrier increases.

Journal of Mathematical ChemistryVol. 63(7)
Northwestern University (US), Instituto de Química Orgánica General (ES), Boğaziçi University (TR), Universitat de Barcelona (ES), Leipzig University (DE)
Generalitat de Catalunya, Universität Leipzig, Agència de Gestió d'Ajuts Universitaris i de Recerca
Affordable and clean energy
Openalex Percentile: Top 93%
Force Microscopy Techniques and Applications
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