To a mechanical model of synthetic catch-bonds
Abstract We support a preliminary determination of the catch-bond character of a mechanical–chemical toy model using a tweezers construction with some modifications. We discuss a theoretical analysis of the problem using Newton trajectories. We propose a two-dimensional potential energy surfaces for this model. We discuss the slip, ideal and catch-bonds for this model using the previous potential parts of Dansuk and Keten (Matter 1:911, 2019). Chemical examples of the ansatz are allosteric reactions, especially FimH proteins. We note again that Newton trajectories provide the theoretical background of mechanochemistry. Construction of a potential energy surface and use of Newton trajectories by Wolfram Mathematica. Calculation of real catch bond behavior. We get for a tweezers model the catch bond behavior. Graphical abstract Two barriers under external force, F. The catch-bond barrier increases.
Authors
- Sinan Keten (ORCID: https://orcid.org/0000-0003-2203-1425)
- Kerim C. Dansuk (ORCID: https://orcid.org/0000-0002-5316-8224)
- Josep María Bofill (ORCID: https://orcid.org/0000-0002-0974-4618)
- Wolfgang Quapp (ORCID: https://orcid.org/0000-0002-0366-1408)
Institutions
- Northwestern University (US)
- Instituto de Química Orgánica General (ES)
- Boğaziçi University (TR)
- Universitat de Barcelona (ES)
- Leipzig University (DE)
Publication Details
- Journal
- Journal of Mathematical Chemistry
- Published
- 2025-05-08
- DOI
- https://doi.org/10.1007/s10910-025-01731-y
- Primary Topic
- Force Microscopy Techniques and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Generalitat de Catalunya
- Universität Leipzig
- Agència de Gestió d'Ajuts Universitaris i de Recerca