Wasserstein Graph Neural Networks for Graphs With Missing Attributes

Missing node attributes pose a common problem in real-world graphs, impacting the performance of graph neural networks' representation learning. Existing GNNs often struggle to effectively leverage incomplete attribute information, as they are not specifically designed for graphs with missing attributes. To address this issue, we propose a novel node representation learning framework called Wasserstein Graph Neural Network (WGNN). Our approach aims to maximize the utility of limited observed attribute information and account for uncertainty caused by missing values. We achieve this by representing nodes as low-dimensional distributions obtained through attribute matrix decomposition. Additionally, we enhance representation expressiveness by introducing a unique message-passing schema that aggregates distributional information from neighboring nodes in the Wasserstein space. We evaluate the performance of WGNN in node classification tasks using both synthetic and real-world datasets under two missing-attribute scenarios. Moreover, we demonstrate the applicability of WGNN in recovering missing values and tackling matrix completion problems, specifically in graphs involving users and items. Experimental results on both tasks convincingly demonstrate the superiority of our proposed method.

Authors

Institutions

Publication Details

Journal
IEEE Transactions on Pattern Analysis and Machine Intelligence
Published
2025-05-08
DOI
https://doi.org/10.1109/tpami.2025.3568480
Citations
1
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
2.48
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Wasserstein Graph Neural Networks for Graphs With Missing Attributes

Yangqiu Song, Tengfei Ma, Yan Wang, Zhixian Chen
1 citations
IEEE Transactions on Pattern Analysis and Machine Intelligence
Advanced Graph Neural Networks
2.48
article

Wasserstein Graph Neural Networks for Graphs With Missing Attributes

Yangqiu Song, Tengfei Ma, Yan Wang, Zhixian Chen
article en
1 citations

Abstract

Missing node attributes pose a common problem in real-world graphs, impacting the performance of graph neural networks' representation learning. Existing GNNs often struggle to effectively leverage incomplete attribute information, as they are not specifically designed for graphs with missing attributes. To address this issue, we propose a novel node representation learning framework called Wasserstein Graph Neural Network (WGNN). Our approach aims to maximize the utility of limited observed attribute information and account for uncertainty caused by missing values. We achieve this by representing nodes as low-dimensional distributions obtained through attribute matrix decomposition. Additionally, we enhance representation expressiveness by introducing a unique message-passing schema that aggregates distributional information from neighboring nodes in the Wasserstein space. We evaluate the performance of WGNN in node classification tasks using both synthetic and real-world datasets under two missing-attribute scenarios. Moreover, we demonstrate the applicability of WGNN in recovering missing values and tackling matrix completion problems, specifically in graphs involving users and items. Experimental results on both tasks convincingly demonstrate the superiority of our proposed method.

IEEE Transactions on Pattern Analysis and Machine IntelligenceVol. 47(8)
Hong Kong University of Science and Technology (HK), Stony Brook University (US)
Openalex Percentile: Top 11%
Advanced Graph Neural Networks
2.48
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Wasserstein Graph Neural Networks for Graphs With Missing Attributes — Yangqiu Song, Tengfei Ma, et al. · IEEE Transactions on Pattern Analysis and Machine Intelligence (2025) | TGRS Research Map | TGRS