[Serum proteomics and machine learning unveil new diagnostic biomarkers for tuberculosis in adolescents and young adults].

Adolescents and young adults (AYAs) are one of the major populations susceptible to tuberculosis. However, little is known about the unique characteristics and diagnostic biomarkers of tuberculosis in this population. In this study, 81 AYAs were recruited, and the high-quality serum proteome of the AYAs with tuberculosis was profiled by quantitative proteomics. The data of serum proteomics indicated that the relative abundance of hemoglobin and apolipoprotein was significantly reduced in the patients with active tuberculosis (ATB). The pathway enrichment analysis showed that the downregulated proteins in the ATB group were mainly involved in the antioxidant and cell detoxification pathways, indicating extensive oxidative stress damage. Random forest (RF) and extreme gradient boosting (XGBoost) were employed to evaluate protein importance, which yielded a set of candidate proteins that can distinguish between ATB and non-ATB. The analysis with the support vector machine algorithm (recursive feature elimination) suggested that the combination of apolipoprotein A-I (APOA1), hemoglobin subunit beta (HBB), and hemoglobin subunit alpha-1 (HBA1) had the highest accuracy and sensitivity in diagnosing ATB. Meanwhile, the levels of hemoglobin (HGB) and albumin (ALB) can be used as blood biochemical indicators to evaluate changes in the protein levels of APOA1 and HBB. This study established the serum proteome landscape of AYAs with tuberculosis and identified new biomarkers for the diagnosis of tuberculosis in this population.

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Publication Details

Journal
PubMed
Published
2025-04-25
DOI
https://doi.org/10.13345/j.cjb.240431
Primary Topic
Tuberculosis Research and Epidemiology
Type
article
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article

[Serum proteomics and machine learning unveil new diagnostic biomarkers for tuberculosis in adolescents and young adults].

Jianping Xie, Xiaoyun Zhao, Yao Tian, Guobin Zhang et al.
PubMed
Tuberculosis Research and Epidemiology
article

[Serum proteomics and machine learning unveil new diagnostic biomarkers for tuberculosis in adolescents and young adults].

Jianping Xie, Xiaoyun Zhao, Yao Tian, Guobin Zhang, He Qian, Hongxiang Xu, Yu Chen
article en

Abstract

Adolescents and young adults (AYAs) are one of the major populations susceptible to tuberculosis. However, little is known about the unique characteristics and diagnostic biomarkers of tuberculosis in this population. In this study, 81 AYAs were recruited, and the high-quality serum proteome of the AYAs with tuberculosis was profiled by quantitative proteomics. The data of serum proteomics indicated that the relative abundance of hemoglobin and apolipoprotein was significantly reduced in the patients with active tuberculosis (ATB). The pathway enrichment analysis showed that the downregulated proteins in the ATB group were mainly involved in the antioxidant and cell detoxification pathways, indicating extensive oxidative stress damage. Random forest (RF) and extreme gradient boosting (XGBoost) were employed to evaluate protein importance, which yielded a set of candidate proteins that can distinguish between ATB and non-ATB. The analysis with the support vector machine algorithm (recursive feature elimination) suggested that the combination of apolipoprotein A-I (APOA1), hemoglobin subunit beta (HBB), and hemoglobin subunit alpha-1 (HBA1) had the highest accuracy and sensitivity in diagnosing ATB. Meanwhile, the levels of hemoglobin (HGB) and albumin (ALB) can be used as blood biochemical indicators to evaluate changes in the protein levels of APOA1 and HBB. This study established the serum proteome landscape of AYAs with tuberculosis and identified new biomarkers for the diagnosis of tuberculosis in this population.

PubMedVol. 41(4)
Shenyang Pharmaceutical University (CN)
Tuberculosis Research and Epidemiology
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[Serum proteomics and machine learning unveil new diagnostic biomarkers for tuberculosis in adolescents and young adults]. — Jianping Xie, Xiaoyun Zhao, et al. · PubMed (2025) | TGRS Research Map | TGRS