Prediction of new candidate proteins and analysis of sub-modules and protein hubs associated with seed development in rice (Oryza sativa) using an ensemble network-based systems biology approach

These findings, including the identified hub proteins and sub-modules, provide a better understanding of the PPI interaction landscape governing seed development in rice. This information is useful for achieving a systems biology understanding of seed development. This study implements an ensemble of algorithms for the analysis and showcases how systems biology techniques can be applied in developmental biology.

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Publication Details

Journal
BMC Plant Biology
Published
2025-05-08
DOI
https://doi.org/10.1186/s12870-025-06595-7
Citations
3
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
Field-Weighted Citation Impact
2.42
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article

Prediction of new candidate proteins and analysis of sub-modules and protein hubs associated with seed development in rice (Oryza sativa) using an ensemble network-based systems biology approach

Pasan Chinthana Fernando, Senuri Piyatissa, Janith Weeraman, Madalena Silva
3 citations
BMC Plant Biology
Microbial Metabolic Engineering and Bioproduction
2.42
article

Prediction of new candidate proteins and analysis of sub-modules and protein hubs associated with seed development in rice (Oryza sativa) using an ensemble network-based systems biology approach

Pasan Chinthana Fernando, Senuri Piyatissa, Janith Weeraman, Madalena Silva
article en
3 citations

Abstract

These findings, including the identified hub proteins and sub-modules, provide a better understanding of the PPI interaction landscape governing seed development in rice. This information is useful for achieving a systems biology understanding of seed development. This study implements an ensemble of algorithms for the analysis and showcases how systems biology techniques can be applied in developmental biology.

BMC Plant BiologyVol. 25(1)
University of Colombo (LK)
Zero hunger
Openalex Percentile: Top 12%
Microbial Metabolic Engineering and Bioproduction
2.42
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Prediction of new candidate proteins and analysis of sub-modules and protein hubs associated with seed development in rice (Oryza sativa) using an ensemble network-based systems biology approach — Pasan Chinthana Fernando, Senuri Piyatissa, et al. · BMC Plant Biology (2025) | TGRS Research Map | TGRS