Enhanced Bioactivity of Natural Products by Halogenation: A Database Survey and Quantum Chemistry Calculation Study
Natural products (NPs) have long been the cornerstone of drug discovery. Halogenated organic NPs are limited, while around one-fourth of approved chemical drugs are organohalogens. This suggests that the introduction of halogens into NPs may enhance their potential for transformation into drugs. In this study, we utilized a matched molecular pair (MMP) approach alongside a database survey to investigate the impact of halogenation on this transformation. The study revealed that halogenation increased the bioactivity of 70.3% of NPs, with 50.3% exhibiting at least a 2-fold enhancement. Halogen bonds (XBs) are prevalent between organohalogens and their targets. To explore whether halogenated NPs could form XBs with their targets, computational studies were performed and demonstrated that halogenated NPs or NP-derived drugs formed strong XBs with their targets, resulting in improved binding affinities. This study highlights the considerable potential of introducing halogens into NPs as a strategic approach for enhancing bioactivity and facilitating the development of drugs.
Authors
- Qingyi Liao
- Weiliang Zhu (ORCID: https://orcid.org/0000-0001-6699-5299)
- Yong Zhang (ORCID: https://orcid.org/0000-0002-1086-7922)
- Zhijian Xu (ORCID: https://orcid.org/0000-0002-3063-8473)
- Jintian Li (ORCID: https://orcid.org/0000-0002-0848-5730)
- Qian Zhang (ORCID: https://orcid.org/0000-0003-3041-643X)
- Mei Shao
- Tingting Cai (ORCID: https://orcid.org/0009-0005-0879-0291)
- Renting Cao
Institutions
- Nanjing University of Chinese Medicine (CN)
- Henan University (CN)
- Chinese Academy of Sciences (CN)
- Shanghai Institute of Materia Medica (CN)
- Drug Discovery Laboratory (Norway) (NO)
- University of Chinese Academy of Sciences (CN)
- State Key Laboratory of Drug Research
- East China Normal University (CN)
Publication Details
- Journal
- Journal of Medicinal Chemistry
- Published
- 2025-05-07
- DOI
- https://doi.org/10.1021/acs.jmedchem.5c00944
- Citations
- 6
- Primary Topic
- Bioactive Compounds and Antitumor Agents
- Type
- article
- Field-Weighted Citation Impact
- 7.84
Funders
- National Natural Science Foundation of China
- Shanghai Municipal Education Commission
- National Key Research and Development Program of China