Prediction of Mycelium-Based Biocatalyst Activity for Perillyl Butyrate Synthesis Using ATR-IR Spectrum

Lyophilized fungal mycelia are a promising class of biocatalysts, offering high stability in organic solvents and at high temperatures as well as reduced environmental footprint compared to free enzymes. However, the screening of fungal strains for catalytic activity in ester bond formation remains a labor-intensive and costly process. In this study, two predictive models were developed to estimate the catalytic efficiency of fungal mycelia for the esterification of perillyl alcohol with butyric acid. The models were based on attenuated total reflectance infrared (ATR-IR) spectral data and experimentally determined esterification yields of 123 fungal strains isolated from the local environment. To reduce the high dimensionality of the ATR-IR data set (1762 predictors), elastic net regularization and principal component analysis (PCA) were applied. A generalized linear model (GLM) using an elastic net achieved a coefficient of determination (R2) of 0.86, while the PCA-based model yielded an R2 of 0.64. These findings demonstrate a strong correlation between the ATR-IR spectral features and the biocatalytic performance of the mycelia, indicating that their catalytic activity can be reliably predicted using the spectral data alone. This approach enables the rapid and inexpensive screening of fungal biocatalysts, significantly reducing the need for time-consuming enzymatic reactions and chromatographic analysis. The catalytic efficiency, expressed as the synthesis yield of perillyl butyrate, can thus be estimated within seconds using the model FN(0,s2)(⟨x,θ̂⟩) ∈ [0,1] where ⟨x,θ̂⟩ is the inner product between the spectral data vector and the estimated model parameters.

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Journal
Industrial & Engineering Chemistry Research
Published
2025-05-07
DOI
https://doi.org/10.1021/acs.iecr.5c00991
Primary Topic
Medicinal Plants and Neuroprotection
Type
article
Field-Weighted Citation Impact
0.00

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article

Prediction of Mycelium-Based Biocatalyst Activity for Perillyl Butyrate Synthesis Using ATR-IR Spectrum

Marzena Baran, Mateusz Kutyła, Łukasz Szajnecki, Edward Kozłowski et al.
Industrial & Engineering Chemistry Research
Medicinal Plants and Neuroprotection
article

Prediction of Mycelium-Based Biocatalyst Activity for Perillyl Butyrate Synthesis Using ATR-IR Spectrum

Marzena Baran, Mateusz Kutyła, Łukasz Szajnecki, Edward Kozłowski, Mariusz Trytek, Amelia Szczepańska, A Sliwa, Kacper Sitkowski, Milena Startek, Dominik Sroka, Eliza Wysokińska, Jakub Jagusiński, Weronika Makuch, Wiktor Stola, Dominik Kotyla, Hanna Tratkowska
article en

Abstract

Lyophilized fungal mycelia are a promising class of biocatalysts, offering high stability in organic solvents and at high temperatures as well as reduced environmental footprint compared to free enzymes. However, the screening of fungal strains for catalytic activity in ester bond formation remains a labor-intensive and costly process. In this study, two predictive models were developed to estimate the catalytic efficiency of fungal mycelia for the esterification of perillyl alcohol with butyric acid. The models were based on attenuated total reflectance infrared (ATR-IR) spectral data and experimentally determined esterification yields of 123 fungal strains isolated from the local environment. To reduce the high dimensionality of the ATR-IR data set (1762 predictors), elastic net regularization and principal component analysis (PCA) were applied. A generalized linear model (GLM) using an elastic net achieved a coefficient of determination (R2) of 0.86, while the PCA-based model yielded an R2 of 0.64. These findings demonstrate a strong correlation between the ATR-IR spectral features and the biocatalytic performance of the mycelia, indicating that their catalytic activity can be reliably predicted using the spectral data alone. This approach enables the rapid and inexpensive screening of fungal biocatalysts, significantly reducing the need for time-consuming enzymatic reactions and chromatographic analysis. The catalytic efficiency, expressed as the synthesis yield of perillyl butyrate, can thus be estimated within seconds using the model FN(0,s2)(⟨x,θ̂⟩) ∈ [0,1] where ⟨x,θ̂⟩ is the inner product between the spectral data vector and the estimated model parameters.

Industrial & Engineering Chemistry ResearchVol. 64(20)
Medical University of Lublin (PL), Maria Curie-Skłodowska University (PL), Lublin University of Technology (PL)
Uniwersytet Marii Curie-Skłodowskiej
Zero hunger
Openalex Percentile: Top 85%
Medicinal Plants and Neuroprotection
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