Spatially barcoding single nuclei to enable single-cell spatial transcriptomics

Single-cell sequencing and spatially-resolved sequencing are two complementary techniques that allow researchers to explore how tissues are constructed and altered during aging and disease. However, rather than performing two experiments, it is often practically, financially, and technically preferable to be able to directly map single-cell sequencing profiles directly back to their location within a tissue to understand how and why the cell has acquired its phenotype. This article details how a novel technology called Slide-tags enables single-cell sequencing whilst preserving the spatial address of profiled cells.

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Publication Details

Journal
The Biochemist
Published
2025-05-05
DOI
https://doi.org/10.1042/bio_2025_112
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

Spatially barcoding single nuclei to enable single-cell spatial transcriptomics

Andrew J. C. Russell
The Biochemist
Single-cell and spatial transcriptomics
article

Spatially barcoding single nuclei to enable single-cell spatial transcriptomics

Andrew J. C. Russell
article en

Abstract

Single-cell sequencing and spatially-resolved sequencing are two complementary techniques that allow researchers to explore how tissues are constructed and altered during aging and disease. However, rather than performing two experiments, it is often practically, financially, and technically preferable to be able to directly map single-cell sequencing profiles directly back to their location within a tissue to understand how and why the cell has acquired its phenotype. This article details how a novel technology called Slide-tags enables single-cell sequencing whilst preserving the spatial address of profiled cells.

The BiochemistVol. 47(2)
Broad Institute (US), Harvard University (US)
Openalex Percentile: Top 91%
Single-cell and spatial transcriptomics
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