Preorganized Electric Fields in Voltage‐Gated Sodium Channels

Enzymes are reported to catalyze reactions by generating electric fields that promote the evolution of the reaction in the active site. Although seldom used outside enzymatic catalysis, electrostatic preorganization theory and language of electric fields can be generalized to other biological macromolecules. Herein, we performed molecular dynamics simulations of human Na<sub>v</sub>1.5, Na<sub>v</sub>1.6, and Na<sub>v</sub>1.7 with the atomic multipole optmimized energetics for biomolecular applications polarizable force field. We show that in the absence of an external potential, charged and uncharged residues generate strong electric fields that assist in Na<sup>+</sup> motion in the pore. This work emphasizes the importance of charge-dipole interactions in modulating Na<sup>+</sup> dynamics, in addition to charge-charge interactions, the focus of a majority of previous studies. Finally, we find that residues share a high level of mutual information through electric fields that can enable the optimization of allosteric pathways.

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Journal
ChemBioChem
Published
2025-05-06
DOI
https://doi.org/10.1002/cbic.202500314
Primary Topic
Protein Structure and Dynamics
Type
article
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article

Preorganized Electric Fields in Voltage‐Gated Sodium Channels

Valerie Vaissier Welborn, Taoyi Chen, Yi Zheng
ChemBioChem
Protein Structure and Dynamics
article

Preorganized Electric Fields in Voltage‐Gated Sodium Channels

Valerie Vaissier Welborn, Taoyi Chen, Yi Zheng
article en

Abstract

Enzymes are reported to catalyze reactions by generating electric fields that promote the evolution of the reaction in the active site. Although seldom used outside enzymatic catalysis, electrostatic preorganization theory and language of electric fields can be generalized to other biological macromolecules. Herein, we performed molecular dynamics simulations of human Na<sub>v</sub>1.5, Na<sub>v</sub>1.6, and Na<sub>v</sub>1.7 with the atomic multipole optmimized energetics for biomolecular applications polarizable force field. We show that in the absence of an external potential, charged and uncharged residues generate strong electric fields that assist in Na<sup>+</sup> motion in the pore. This work emphasizes the importance of charge-dipole interactions in modulating Na<sup>+</sup> dynamics, in addition to charge-charge interactions, the focus of a majority of previous studies. Finally, we find that residues share a high level of mutual information through electric fields that can enable the optimization of allosteric pathways.

ChemBioChemVol. 26(10)
Virginia Tech (US)
Clean water and sanitation
Openalex Percentile: Top 91%
Protein Structure and Dynamics
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Preorganized Electric Fields in Voltage‐Gated Sodium Channels — Valerie Vaissier Welborn, Taoyi Chen, et al. · ChemBioChem (2025) | TGRS Research Map | TGRS