StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations

StructMAn is a method for protein structural annotation. It describes each position of a protein sequence or specific variants in it in terms of their importance for the three-dimensional (3D) structure of the protein and its interactions with other molecules. StructMAn maps, aligns, and aggregates data from experimentally resolved and predicted 3D structures of proteins and their homologs for any given protein sequence and/or a combination of mutations in it. The results provide structural annotation for every amino acid position allowing a detailed structural analysis. Furthermore, StructMAn enables generation of a wide variety of position-specific high-quality structural features that can be leveraged in machine learning applications. With the new web server StructMAn 2.0 Web, we provide a user-friendly way to use StructMAn offering an easy-to-use input interface and a comprehensive visualization for the various results of StructMAn. StructMAn 2.0 Web is available at https://tools.helmholtz-hips.de/structman.

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Publication Details

Journal
Nucleic Acids Research
Published
2025-05-06
DOI
https://doi.org/10.1093/nar/gkaf381
Citations
3
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
2.42

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article

StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations

Alexander Greß, Sebastian Keller, Pascal Hirsch, Alper Yurtseven et al.
3 citations
Nucleic Acids Research
Genomics and Phylogenetic Studies
2.42
article

StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations

Alexander Greß, Sebastian Keller, Pascal Hirsch, Alper Yurtseven, Olga V. Kalinina
article en
3 citations

Abstract

StructMAn is a method for protein structural annotation. It describes each position of a protein sequence or specific variants in it in terms of their importance for the three-dimensional (3D) structure of the protein and its interactions with other molecules. StructMAn maps, aligns, and aggregates data from experimentally resolved and predicted 3D structures of proteins and their homologs for any given protein sequence and/or a combination of mutations in it. The results provide structural annotation for every amino acid position allowing a detailed structural analysis. Furthermore, StructMAn enables generation of a wide variety of position-specific high-quality structural features that can be leveraged in machine learning applications. With the new web server StructMAn 2.0 Web, we provide a user-friendly way to use StructMAn offering an easy-to-use input interface and a comprehensive visualization for the various results of StructMAn. StructMAn 2.0 Web is available at https://tools.helmholtz-hips.de/structman.

Nucleic Acids ResearchVol. 53(W1)
Helmholtz Centre for Infection Research (DE), Helmholtz Institute for Pharmaceutical Research Saarland (DE), Saarland University (DE)
Bundesministerium für Bildung und Forschung
Openalex Percentile: Top 12%
Genomics and Phylogenetic Studies
2.42
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StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations — Alexander Greß, Sebastian Keller, et al. · Nucleic Acids Research (2025) | TGRS Research Map | TGRS