Comparative evaluation of hybrid and individual models for predicting soybean yellow mosaic virus incidence

Forecasting the severity of crop diseases is crucial for agricultural productivity and can be achieved through statistical and machine learning techniques. Predictive models that consider weather conditions during critical growth stages of crops have shown promising accuracy. However, selecting the most suitable forecasting model remains a challenge. This research investigates the impact of various weather factors on Soybean Yellow Mosaic Virus (SYMV) incidence. Specifically, six multivariate models Stepwise Multiple Linear Regression (SMLR), Artificial Neural Networks (ANN), Least Absolute Shrinkage and Selection Operator (LASSO), Ridge Regression (RR), Elastic Net (ELNET), and SMLR_ANN both direct and with Principal Component Analysis (PCA)-were developed using 20 years of data (2001 to 2020) to predict the severity of soybean disease in Pantnagar, Uttarakhand. The dataset was divided into two parts, with 80% used for calibration and the remaining 20% for validation. Model accuracy was evaluated using several statistical criteria, including R², RMSE, nRMSE, MAE, PE, and EF. The results indicated that the PCA-SMLR-ANN (nRMSE<sub>val</sub> = 0.76%) model was the most effective predictor of soybean disease severity, closely followed by the PCA-ANN (nRMSE<sub>val</sub> = 3.67%) model. Hybrid models such as PCA-SMLR-ANN and PCA-ANN outperformed individual models like SMLR (nRMSE<sub>val</sub> = 47.72%) and ANN (nRMSE<sub>val</sub> = 6.82%). The performance ranking of the models is as follows: PCA-SMLR-ANN ≈ PCA-ANN ≈ SMLR-ANN ≈ ANN > PCA-ELNET > PCA-Ridge > ELNET ≈ RR > PCA-LASSO > LASSO > PCA-SMLR ≈ SMLR. These findings highlight the superior efficiency of hybrid models in predicting soybean disease severity based on weather indices in the study region.

Authors

Institutions

Publication Details

Journal
Scientific Reports
Published
2025-05-06
DOI
https://doi.org/10.1038/s41598-025-99427-5
Citations
3
Primary Topic
Plant Virus Research Studies
Type
article
Field-Weighted Citation Impact
5.25

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Comparative evaluation of hybrid and individual models for predicting soybean yellow mosaic virus incidence

Surbhi Kumari, Parul Setiya, Krishna Kumar Yadav, Amel Gacem et al.
3 citations
Scientific Reports
Plant Virus Research Studies
5.25
article

Comparative evaluation of hybrid and individual models for predicting soybean yellow mosaic virus incidence

Surbhi Kumari, Parul Setiya, Krishna Kumar Yadav, Amel Gacem, Ahmad J. Obaidullah, Anurag Satpathi, Dinesh Kumar Vishwakarma, Vinod Kumar, Özgür Kişi, Ajeet Singh Nain
article en
3 citations

Abstract

Forecasting the severity of crop diseases is crucial for agricultural productivity and can be achieved through statistical and machine learning techniques. Predictive models that consider weather conditions during critical growth stages of crops have shown promising accuracy. However, selecting the most suitable forecasting model remains a challenge. This research investigates the impact of various weather factors on Soybean Yellow Mosaic Virus (SYMV) incidence. Specifically, six multivariate models Stepwise Multiple Linear Regression (SMLR), Artificial Neural Networks (ANN), Least Absolute Shrinkage and Selection Operator (LASSO), Ridge Regression (RR), Elastic Net (ELNET), and SMLR_ANN both direct and with Principal Component Analysis (PCA)-were developed using 20 years of data (2001 to 2020) to predict the severity of soybean disease in Pantnagar, Uttarakhand. The dataset was divided into two parts, with 80% used for calibration and the remaining 20% for validation. Model accuracy was evaluated using several statistical criteria, including R², RMSE, nRMSE, MAE, PE, and EF. The results indicated that the PCA-SMLR-ANN (nRMSE<sub>val</sub> = 0.76%) model was the most effective predictor of soybean disease severity, closely followed by the PCA-ANN (nRMSE<sub>val</sub> = 3.67%) model. Hybrid models such as PCA-SMLR-ANN and PCA-ANN outperformed individual models like SMLR (nRMSE<sub>val</sub> = 47.72%) and ANN (nRMSE<sub>val</sub> = 6.82%). The performance ranking of the models is as follows: PCA-SMLR-ANN ≈ PCA-ANN ≈ SMLR-ANN ≈ ANN > PCA-ELNET > PCA-Ridge > ELNET ≈ RR > PCA-LASSO > LASSO > PCA-SMLR ≈ SMLR. These findings highlight the superior efficiency of hybrid models in predicting soybean disease severity based on weather indices in the study region.

Scientific ReportsVol. 15(1)
Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir (IN), Ilia State University (GE), Korea University (KR), Thi Qar University (IQ), Govind Ballabh Pant University of Agriculture and Technology (IN), King Saud University (SA), Technical University of Applied Sciences Lübeck (DE), Al-Ayen Iraqi University (IQ), Saveetha University (IN), University of Skikda (DZ)
King Saud University
Zero hunger
Openalex Percentile: Top 6%
Plant Virus Research Studies
5.25
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.