<i>De novo</i> assembly and annotation of the <i>Empoasca fabae</i> mitochondrial genome

This study presents the assembly and annotation of the full-length mitochondrial genome for the leafhopper species <i>Empoasca fabae</i> Harris, 1841. The mitogenome was obtained from a contig-level assembly with the identified mitochondrial genome being 14,873 bp in length. The base composition was A (38.8%), T (39.1%), C (11.7%), and G (10.4%). The mitogenome comprised 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and showed a unique, non-AT-rich D-loop region. Phylogenetic analysis confirmed the placement of <i>E. fabae</i> within the subfamily Typhlocybinae, clustering with other species in the <i>Empoasca</i> genus.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2025-05-05
DOI
https://doi.org/10.1080/23802359.2025.2498740
Citations
3
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
2.42

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article

De novo assembly and annotation of the Empoasca fabae mitochondrial genome

Edel Pérez‐López, Soham Mukhopadhyay, Joshua Molligan, Jordanne Jacques
3 citations
Mitochondrial DNA Part B
Genomics and Phylogenetic Studies
2.42
article

De novo assembly and annotation of the Empoasca fabae mitochondrial genome

Edel Pérez‐López, Soham Mukhopadhyay, Joshua Molligan, Jordanne Jacques
article en
3 citations

Abstract

This study presents the assembly and annotation of the full-length mitochondrial genome for the leafhopper species <i>Empoasca fabae</i> Harris, 1841. The mitogenome was obtained from a contig-level assembly with the identified mitochondrial genome being 14,873 bp in length. The base composition was A (38.8%), T (39.1%), C (11.7%), and G (10.4%). The mitogenome comprised 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and showed a unique, non-AT-rich D-loop region. Phylogenetic analysis confirmed the placement of <i>E. fabae</i> within the subfamily Typhlocybinae, clustering with other species in the <i>Empoasca</i> genus.

Mitochondrial DNA Part BVol. 10(6)
Université Laval (CA)
Ministère de l'Agriculture, des Pêcheries et de l'Alimentation, Fonds de recherche du Québec – Nature et technologies
Zero hunger
Openalex Percentile: Top 12%
Genomics and Phylogenetic Studies
2.42
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