Structural insights into thraustochytrid-specific lipases using alphafold to identify the role of GXSXG motif

Our study provides novel insights regarding the structure and ligand binding affinities for thraustochytrid specific lipases which are diversified attributed to the heterogeneity within the catalytic triads. In conclusion, we hypothesize that differential localization and higher binding efficiency of thraustochytrid specific lipases allow the microbe to efficiently utilize oil substrates. These thraustochytrid-specific lipases are potential candidates for commercialization as large-scale production of thraustochytrids can be achieved sustainably by cultivating on sustainable substrates and these enzymes are highly efficient and robust.

Authors

Institutions

Publication Details

Journal
BMC Biotechnology
Published
2025-05-05
DOI
https://doi.org/10.1186/s12896-025-00972-8
Citations
1
Primary Topic
Enzyme Catalysis and Immobilization
Type
article
Field-Weighted Citation Impact
0.81

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Structural insights into thraustochytrid-specific lipases using alphafold to identify the role of GXSXG motif

Iqra Mariam, Paul Christakopoulos, Ulrika Rova, Λεωνίδας Μάτσακας et al.
1 citations
BMC Biotechnology
Enzyme Catalysis and Immobilization
0.81
article

Structural insights into thraustochytrid-specific lipases using alphafold to identify the role of GXSXG motif

Iqra Mariam, Paul Christakopoulos, Ulrika Rova, Λεωνίδας Μάτσακας, Alok Patel
article en
1 citations

Abstract

Our study provides novel insights regarding the structure and ligand binding affinities for thraustochytrid specific lipases which are diversified attributed to the heterogeneity within the catalytic triads. In conclusion, we hypothesize that differential localization and higher binding efficiency of thraustochytrid specific lipases allow the microbe to efficiently utilize oil substrates. These thraustochytrid-specific lipases are potential candidates for commercialization as large-scale production of thraustochytrids can be achieved sustainably by cultivating on sustainable substrates and these enzymes are highly efficient and robust.

BMC BiotechnologyVol. 25(1)
Luleå University of Technology (SE)
Svenska Forskningsrådet Formas, Vetenskapsrådet, Kempestiftelserna
Life below water
Openalex Percentile: Top 28%
Enzyme Catalysis and Immobilization
0.81
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Structural insights into thraustochytrid-specific lipases using alphafold to identify the role of GXSXG motif — Iqra Mariam, Paul Christakopoulos, et al. · BMC Biotechnology (2025) | TGRS Research Map | TGRS