GLOW-DL: Generalized Light-Optimized Workflow with Deep Learning for Contamination Detection Using Fluorescence Imaging in Variable Conditions

Abstract Purpose This study aims to improve fluorescence imaging techniques for detecting surface contamination under various ambient light conditions. The major challenge addressed is the interference from ambient light, which diminishes fluorescence contrast and hinders accurate contaminant detection. Methods and Results We optimized key imaging parameters, including exposure time, synchronization of pulsed LEDs with camera exposure, and background subtraction. A noise-aware training approach was also applied using the YOLOv8 deep learning model to increase the model’s robustness to real-world noise. Results demonstrated that LED pulse synchronization enhanced image quality by reducing the impact of ambient light and increasing the signal-to-noise ratio by 25%. Extending exposure times from 3 to 21 ms increased fluorescence intensity by 35%, although it introduced a risk of motion blur. A refined background subtraction method significantly improved contrast, with up to a 30% enhancement, particularly under high ambient light levels, while maintaining controlled noise levels that were consistently lower in higher light conditions. Including Gaussian, Poisson, and stripe noise in training datasets substantially increased detection precision from 62.2 to 71.8% in low-noise environments and maintained precision at 60.8% in high-noise conditions. Conclusion The study confirms that optimized exposure settings, synchronized pulsed illumination, and noise-aware training substantially enhance the accuracy and reliability of fluorescence imaging for contamination detection. These strategies collectively offer a robust solution for improving contamination monitoring in environments with variable and challenging lighting, broadening the practical applications of fluorescence imaging.

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Publication Details

Journal
Journal of Biosystems Engineering
Published
2025-05-05
DOI
https://doi.org/10.1007/s42853-025-00262-3
Citations
4
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
6.54

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article

GLOW-DL: Generalized Light-Optimized Workflow with Deep Learning for Contamination Detection Using Fluorescence Imaging in Variable Conditions

Jianwei Qin, Hamid Reza Marateb, Fartash Vasefi, Kouhyar Tavakolian et al.
4 citations
Journal of Biosystems Engineering
Cell Image Analysis Techniques
6.54
article

GLOW-DL: Generalized Light-Optimized Workflow with Deep Learning for Contamination Detection Using Fluorescence Imaging in Variable Conditions

Jianwei Qin, Hamid Reza Marateb, Fartash Vasefi, Kouhyar Tavakolian, Hamed Taheri Gorji, Michael L. Johnson, Insuck Baek, Moon S. Kim, Zachary Downs, Bo Liang, Diane E. Chan, Mahsa Aliee, Kaylee Yaggie
article en
4 citations

Abstract

Abstract Purpose This study aims to improve fluorescence imaging techniques for detecting surface contamination under various ambient light conditions. The major challenge addressed is the interference from ambient light, which diminishes fluorescence contrast and hinders accurate contaminant detection. Methods and Results We optimized key imaging parameters, including exposure time, synchronization of pulsed LEDs with camera exposure, and background subtraction. A noise-aware training approach was also applied using the YOLOv8 deep learning model to increase the model’s robustness to real-world noise. Results demonstrated that LED pulse synchronization enhanced image quality by reducing the impact of ambient light and increasing the signal-to-noise ratio by 25%. Extending exposure times from 3 to 21 ms increased fluorescence intensity by 35%, although it introduced a risk of motion blur. A refined background subtraction method significantly improved contrast, with up to a 30% enhancement, particularly under high ambient light levels, while maintaining controlled noise levels that were consistently lower in higher light conditions. Including Gaussian, Poisson, and stripe noise in training datasets substantially increased detection precision from 62.2 to 71.8% in low-noise environments and maintained precision at 60.8% in high-noise conditions. Conclusion The study confirms that optimized exposure settings, synchronized pulsed illumination, and noise-aware training substantially enhance the accuracy and reliability of fluorescence imaging for contamination detection. These strategies collectively offer a robust solution for improving contamination monitoring in environments with variable and challenging lighting, broadening the practical applications of fluorescence imaging.

Journal of Biosystems EngineeringVol. 50(2)
University of North Dakota (US), Beltsville Agricultural Research Center (US), Office of Legacy Management (US), Grand Forks Air Force Base (US), Universitat Politècnica de Catalunya (ES)
U.S. Army Combat Capabilities Development Command, DEVCOM Army Research Laboratory
Openalex Percentile: Top 4%
Cell Image Analysis Techniques
6.54
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