Post–Column Guanosine Addition as a Screening Tool in the Search for Effective G–Quadruplex Binders—A Case Study of Achyrocline satureioides Phenolic Compounds

Polyphenols make a numerous and diverse group of plant secondary metabolites exhibiting remarkable anticancer activities, often attributed to their G-quadruplex binding properties. Therefore, there is a need to develop a high-throughput screening assay which would permit the evaluation of polyphenols' binding properties toward G-quadruplex. As deoxyguanosine and guanosine are essential and key building blocks of G-quadruplexes, the stabilities of their adducts with polyphenols may reflect the stabilities of polyphenols-G-quadruplex adducts. In this study, deoxyguanosine/guanosine post-column addition experiments have been performed during HPLC-MS analysis of <i>Achyrocline satureioides</i> extract. The stabilities of the deoxyguanosine/guanosine adducts with 3-<i>O</i>-methylquercetin-7-<i>O</i>-glucoside, 4'-hydroxydehydrokawain-4'-<i>O</i>-glucoside, and 3,5-di-<i>O</i>-caffeoylquinic acid-compounds identified in the <i>Achyrocline satureioides</i> extract-have been tested by using collision-induced dissociation 'in-source'. The obtained results show that the identified compounds form more stable adducts with deoxyguanosine and guanosine than the standards used for comparison, namely isoquercitrin and rutin. The performed molecular docking provided some insight into the structure of the adducts and revealed that multiple interactions are of key importance for their stabilities.

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Journal
International Journal of Molecular Sciences
Published
2025-05-01
DOI
https://doi.org/10.3390/ijms26094312
Primary Topic
DNA and Nucleic Acid Chemistry
Type
article
Field-Weighted Citation Impact
0.00

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article

Post–Column Guanosine Addition as a Screening Tool in the Search for Effective G–Quadruplex Binders—A Case Study of Achyrocline satureioides Phenolic Compounds

Olga Stężycka, Małgorzata Kasperkowiak, Marcin Hoffmann, Monika Beszterda et al.
International Journal of Molecular Sciences
DNA and Nucleic Acid Chemistry
article

Post–Column Guanosine Addition as a Screening Tool in the Search for Effective G–Quadruplex Binders—A Case Study of Achyrocline satureioides Phenolic Compounds

Olga Stężycka, Małgorzata Kasperkowiak, Marcin Hoffmann, Monika Beszterda, Damian Nowak, Magdalena Frańska
article en

Abstract

Polyphenols make a numerous and diverse group of plant secondary metabolites exhibiting remarkable anticancer activities, often attributed to their G-quadruplex binding properties. Therefore, there is a need to develop a high-throughput screening assay which would permit the evaluation of polyphenols' binding properties toward G-quadruplex. As deoxyguanosine and guanosine are essential and key building blocks of G-quadruplexes, the stabilities of their adducts with polyphenols may reflect the stabilities of polyphenols-G-quadruplex adducts. In this study, deoxyguanosine/guanosine post-column addition experiments have been performed during HPLC-MS analysis of <i>Achyrocline satureioides</i> extract. The stabilities of the deoxyguanosine/guanosine adducts with 3-<i>O</i>-methylquercetin-7-<i>O</i>-glucoside, 4'-hydroxydehydrokawain-4'-<i>O</i>-glucoside, and 3,5-di-<i>O</i>-caffeoylquinic acid-compounds identified in the <i>Achyrocline satureioides</i> extract-have been tested by using collision-induced dissociation 'in-source'. The obtained results show that the identified compounds form more stable adducts with deoxyguanosine and guanosine than the standards used for comparison, namely isoquercitrin and rutin. The performed molecular docking provided some insight into the structure of the adducts and revealed that multiple interactions are of key importance for their stabilities.

International Journal of Molecular SciencesVol. 26(9)
Poznań University of Technology (PL), University of Life Sciences in Poznań (PL), Adam Mickiewicz University in Poznań (PL)
Ministry of Science and Higher Education of the Russian Federation
Openalex Percentile: Top 92%
DNA and Nucleic Acid Chemistry
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