CSI botany: DNA barcode fingerprints verify identities of aquatic plants in Van Cortlandt Park, New York

Biodiversity surveys rely on accurate species identification as an important component to address increasing rates of extinction. However, morphology-based identification may be hindered by a lack of taxonomic expertise, especially in the presence of cryptic exotics, taxa that are morphologically indistinguishable from natives. This study applies both taxonomic keys and DNA barcodes to identify two potential cryptic wetland plants in Van Cortlandt Park, Bronx, NY, as part of an ongoing floristic inventory. Samples of the park water lilies (Nymphaea spp.) and cattails (Typha spp.) were collected from different stands between 2018 and 2019 and morphologically recorded. Leaf samples were also used for DNA extraction and sequencing of plastid and nuclear barcodes: rbcL and ITS for the water lilies and trnL-trnF, psbA-trnH, and ITS for the cattails. Both morphological and molecular datasets were compared via phylogenetic analyses to artificial samples composed of idealized morphological keys and published GenBank barcode sequences, respectively. In both approaches, there was strong phylogenetic support for the water lilies as the native Nymphaea odorata rather than the exotic N. alba (BS > 90%; BPP = 1.0), which was previously suggested, and for the cattails as both the native Typha latifolia and exotic T. angustifolia (BS > 90%; BPP = 1.0). There was limited support for tentative hybridization between the park cattails, which separated morphologically similar broad leaf samples between groupings containing the different species. Application of DNA barcodes to this and other such surveys may improve the ability of conservationists and park management efforts to meet biodiversity goals by providing increased confidence in the accurate identification of potentially troublesome species.

Authors

Institutions

Publication Details

Journal
The Journal of the Torrey Botanical Society
Published
2024-12-23
DOI
https://doi.org/10.3159/torrey-d-24-00025.1
Primary Topic
Botany, Ecology, and Taxonomy Studies
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

CSI botany: DNA barcode fingerprints verify identities of aquatic plants in Van Cortlandt Park, New York

Lorena Vega, Jack Henning
The Journal of the Torrey Botanical Society
Botany, Ecology, and Taxonomy Studies
article

CSI botany: DNA barcode fingerprints verify identities of aquatic plants in Van Cortlandt Park, New York

Lorena Vega, Jack Henning
article en

Abstract

Biodiversity surveys rely on accurate species identification as an important component to address increasing rates of extinction. However, morphology-based identification may be hindered by a lack of taxonomic expertise, especially in the presence of cryptic exotics, taxa that are morphologically indistinguishable from natives. This study applies both taxonomic keys and DNA barcodes to identify two potential cryptic wetland plants in Van Cortlandt Park, Bronx, NY, as part of an ongoing floristic inventory. Samples of the park water lilies (Nymphaea spp.) and cattails (Typha spp.) were collected from different stands between 2018 and 2019 and morphologically recorded. Leaf samples were also used for DNA extraction and sequencing of plastid and nuclear barcodes: rbcL and ITS for the water lilies and trnL-trnF, psbA-trnH, and ITS for the cattails. Both morphological and molecular datasets were compared via phylogenetic analyses to artificial samples composed of idealized morphological keys and published GenBank barcode sequences, respectively. In both approaches, there was strong phylogenetic support for the water lilies as the native Nymphaea odorata rather than the exotic N. alba (BS > 90%; BPP = 1.0), which was previously suggested, and for the cattails as both the native Typha latifolia and exotic T. angustifolia (BS > 90%; BPP = 1.0). There was limited support for tentative hybridization between the park cattails, which separated morphologically similar broad leaf samples between groupings containing the different species. Application of DNA barcodes to this and other such surveys may improve the ability of conservationists and park management efforts to meet biodiversity goals by providing increased confidence in the accurate identification of potentially troublesome species.

The Journal of the Torrey Botanical SocietyVol. 152(2)
Lehman College (US)
Openalex Percentile: Top 84%
Botany, Ecology, and Taxonomy Studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.