Decrypting the Unusual Structure and σ-Hole Interactions of the XC(NO2)3 (X=F, Cl, Br, and I) Compounds Using Quasi-Atomic Orbitals

This work reports the quasi-atomic orbital analysis of the XC(NO<sub>2</sub>)<sub>3</sub> (X=F, Cl, Br, and I) compounds and shows that the interactions between the C-N σ bonds and the lone electron pairs on the halogen atom and oxygen atoms of the nitro groups may contribute to the unusually short C-X distances observed. While the presence of a σ-hole on the halogen atom of the XC(NO<sub>2</sub>)<sub>3</sub> compound may not be obvious from the electron density distribution, an analysis of the intermolecular forces of the NH<sub>3</sub>--XC(NO<sub>2</sub>)<sub>3</sub> complexes suggests a σ -hole interaction between the nitrogen lone pair and halogen atom X (X=Cl, Br, and I) in the linear N--X-C configuration, where electrostatics and exchange forces dominate. The linear N--X-C bond in these systems is shown to have a noticeable covalent character, which is captured in the polarization energy term. Complexation with the ammonia nucleophile is shown to affect the electronic structure of the entire compounds, notably the oxygen/halogen lone electron pairs interactions with the C-N σ bonds.

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Publication Details

Journal
Molecules
Published
2025-04-29
DOI
https://doi.org/10.3390/molecules30091986
Citations
2
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
3.51

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article

Decrypting the Unusual Structure and σ-Hole Interactions of the XC(NO2)3 (X=F, Cl, Br, and I) Compounds Using Quasi-Atomic Orbitals

Emilie B. Guidez
2 citations
Molecules
Crystallography and molecular interactions
3.51
article

Decrypting the Unusual Structure and σ-Hole Interactions of the XC(NO2)3 (X=F, Cl, Br, and I) Compounds Using Quasi-Atomic Orbitals

Emilie B. Guidez
article en
2 citations

Abstract

This work reports the quasi-atomic orbital analysis of the XC(NO<sub>2</sub>)<sub>3</sub> (X=F, Cl, Br, and I) compounds and shows that the interactions between the C-N σ bonds and the lone electron pairs on the halogen atom and oxygen atoms of the nitro groups may contribute to the unusually short C-X distances observed. While the presence of a σ-hole on the halogen atom of the XC(NO<sub>2</sub>)<sub>3</sub> compound may not be obvious from the electron density distribution, an analysis of the intermolecular forces of the NH<sub>3</sub>--XC(NO<sub>2</sub>)<sub>3</sub> complexes suggests a σ -hole interaction between the nitrogen lone pair and halogen atom X (X=Cl, Br, and I) in the linear N--X-C configuration, where electrostatics and exchange forces dominate. The linear N--X-C bond in these systems is shown to have a noticeable covalent character, which is captured in the polarization energy term. Complexation with the ammonia nucleophile is shown to affect the electronic structure of the entire compounds, notably the oxygen/halogen lone electron pairs interactions with the C-N σ bonds.

MoleculesVol. 30(9)
University of Colorado Denver (US)
University of Colorado Denver
Affordable and clean energy
Openalex Percentile: Top 8%
Crystallography and molecular interactions
3.51
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