Identification and Functional Exploration of the ALKBH Gene Family in Oriental Melon Fruit Ripening

N6-methyladenosine (m<sup>6</sup>A) methylation functions as a vital post-transcriptional and epigenetic modification in higher plants regulated by α-ketoglutarate-dependent dioxygenases (ALKBH). However, the role of ALKBH genes in oriental melon (<i>Cucumis melo</i> L.) fruit ripening has not been explored. Therefore, we treated oriental melon with an exogenous m<sup>6</sup>A demethylase inhibitor (mechlorfenamic acid) then analyzed endogenous ethylene production and ripening-related indicators to explore the effects of m<sup>6</sup>A methylation on ripening. Bioinformatics and real-time quantitative PCR analyses were used to determine the impact of <i>ALKBH</i> genes on key ethylene synthesis gene expression. Treatment effectively inhibited endogenous ethylene production, firmness changes, and soluble solid contents, thereby extending fruit ripening. Eight <i>ALKBH</i> gene family members belonging to five major groups were identified in the melon genome. All members were expressed in ripening fruits, with different expression patterns during ripening. <i>CmALKBH6</i>, <i>CmALKBH7</i>, and <i>CmALKBH8</i> expression was inhibited by an ethylene inhibitor (1-methylcyclopropene). The transient overexpression (OE) of <i>CmALKBH8</i> in oriental melon led to the increased expression of the ethylene synthesis genes <i>CmACS1</i>, <i>CmACS2</i>, and <i>CmACO1</i>. In summary, the ethylene-regulated gene <i>CmALKBH8</i> may participate in oriental melon fruit ripening regulation by modulating the methylation levels of ethylene synthesis-related genes. These findings help us better understand how m<sup>6</sup>A methylation regulates melon ripening.

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Journal
International Journal of Molecular Sciences
Published
2025-04-29
DOI
https://doi.org/10.3390/ijms26094254
Citations
1
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
0.81

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article

Identification and Functional Exploration of the ALKBH Gene Family in Oriental Melon Fruit Ripening

Qiang Chen, Xinqi Guo, Hongbo Pang, Ying Zhang et al.
1 citations
International Journal of Molecular Sciences
RNA modifications and cancer
0.81
article

Identification and Functional Exploration of the ALKBH Gene Family in Oriental Melon Fruit Ripening

Qiang Chen, Xinqi Guo, Hongbo Pang, Ying Zhang, Chong Zhang
article en
1 citations

Abstract

N6-methyladenosine (m<sup>6</sup>A) methylation functions as a vital post-transcriptional and epigenetic modification in higher plants regulated by α-ketoglutarate-dependent dioxygenases (ALKBH). However, the role of ALKBH genes in oriental melon (<i>Cucumis melo</i> L.) fruit ripening has not been explored. Therefore, we treated oriental melon with an exogenous m<sup>6</sup>A demethylase inhibitor (mechlorfenamic acid) then analyzed endogenous ethylene production and ripening-related indicators to explore the effects of m<sup>6</sup>A methylation on ripening. Bioinformatics and real-time quantitative PCR analyses were used to determine the impact of <i>ALKBH</i> genes on key ethylene synthesis gene expression. Treatment effectively inhibited endogenous ethylene production, firmness changes, and soluble solid contents, thereby extending fruit ripening. Eight <i>ALKBH</i> gene family members belonging to five major groups were identified in the melon genome. All members were expressed in ripening fruits, with different expression patterns during ripening. <i>CmALKBH6</i>, <i>CmALKBH7</i>, and <i>CmALKBH8</i> expression was inhibited by an ethylene inhibitor (1-methylcyclopropene). The transient overexpression (OE) of <i>CmALKBH8</i> in oriental melon led to the increased expression of the ethylene synthesis genes <i>CmACS1</i>, <i>CmACS2</i>, and <i>CmACO1</i>. In summary, the ethylene-regulated gene <i>CmALKBH8</i> may participate in oriental melon fruit ripening regulation by modulating the methylation levels of ethylene synthesis-related genes. These findings help us better understand how m<sup>6</sup>A methylation regulates melon ripening.

International Journal of Molecular SciencesVol. 26(9)
Shenyang Normal University (CN)
Natural Science Foundation of Liaoning Province
Openalex Percentile: Top 29%
RNA modifications and cancer
0.81
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