Unveiling the Reaction Pathway of Oxidative Aldehyde Deformylation by a MOF-Based Cytochrome P450 Mimic

Understanding the reaction pathway of aldehyde deformylation catalyzed by natural enzymes has shown significance in developing synthetic methodologies and new catalysts in organic, biochemical, and medicinal chemistry. However, unlike other well-rationalized chemical processes catalyzed by cytochrome P450 (Cyt P450) superfamilies, the detailed mechanism of the P450-catalyzed aldehyde deformylation is still controversial. Challenges lie in establishing synthetic models to decipher the reaction pathways, which normally are homogeneous systems for precisely mimicking the structure of the active sites in P450s. Herein, we report a heterogeneous Cyt P450 aromatase mimic based on a porphyrinic metal–organic framework (MOF) PCN-224. Through post-metalation of iron(II) triflate with the porphyrin unit, a five-coordinated FeII(Porp) compound could be afforded and isolated inside the resulting PCN-224(Fe) to mimic the heme active site in P450. This MOF-based P450 mimic could efficiently catalyze the oxidative deformylation of aldehydes to the corresponding ketones under room temperature using O2 as the sole oxidant and triethylamine as the electron source, analogous to the NADPH reductase. The catalyst could be completely recovered after the catalytic reaction without undergoing structural decomposition or compromising its reactivity, representing it as one of the most valid mimics of P450 aromatase from both the structural and functional aspects. A mechanistic study reveals a strong correlation between the catalytic activity and the Cα-H bond dissociation energy of the aldehyde substrates, which, in conjunction with various trapping experiments, confirms an unconventional mechanism initiated by hydrogen atom abstraction.

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Publication Details

Journal
Catalysts
Published
2025-04-29
DOI
https://doi.org/10.3390/catal15050436
Primary Topic
Pharmacogenetics and Drug Metabolism
Type
article
Field-Weighted Citation Impact
0.00

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article

Unveiling the Reaction Pathway of Oxidative Aldehyde Deformylation by a MOF-Based Cytochrome P450 Mimic

Wentian Zhou, Zehua Luo, Yingwei Li, Junying Chen
Catalysts
Pharmacogenetics and Drug Metabolism
article

Unveiling the Reaction Pathway of Oxidative Aldehyde Deformylation by a MOF-Based Cytochrome P450 Mimic

Wentian Zhou, Zehua Luo, Yingwei Li, Junying Chen
article en

Abstract

Understanding the reaction pathway of aldehyde deformylation catalyzed by natural enzymes has shown significance in developing synthetic methodologies and new catalysts in organic, biochemical, and medicinal chemistry. However, unlike other well-rationalized chemical processes catalyzed by cytochrome P450 (Cyt P450) superfamilies, the detailed mechanism of the P450-catalyzed aldehyde deformylation is still controversial. Challenges lie in establishing synthetic models to decipher the reaction pathways, which normally are homogeneous systems for precisely mimicking the structure of the active sites in P450s. Herein, we report a heterogeneous Cyt P450 aromatase mimic based on a porphyrinic metal–organic framework (MOF) PCN-224. Through post-metalation of iron(II) triflate with the porphyrin unit, a five-coordinated FeII(Porp) compound could be afforded and isolated inside the resulting PCN-224(Fe) to mimic the heme active site in P450. This MOF-based P450 mimic could efficiently catalyze the oxidative deformylation of aldehydes to the corresponding ketones under room temperature using O2 as the sole oxidant and triethylamine as the electron source, analogous to the NADPH reductase. The catalyst could be completely recovered after the catalytic reaction without undergoing structural decomposition or compromising its reactivity, representing it as one of the most valid mimics of P450 aromatase from both the structural and functional aspects. A mechanistic study reveals a strong correlation between the catalytic activity and the Cα-H bond dissociation energy of the aldehyde substrates, which, in conjunction with various trapping experiments, confirms an unconventional mechanism initiated by hydrogen atom abstraction.

CatalystsVol. 15(5)
South China University of Technology (CN)
National Natural Science Foundation of China, Natural Science Foundation of Guangdong Province, South China University of Technology, State Key Laboratory of Pulp and Paper Engineering
Openalex Percentile: Top 88%
Pharmacogenetics and Drug Metabolism
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