Including Physics-Informed Atomization Constraints in Neural Networks for Reactive Chemistry

Machine learning interatomic potentials (MLIPs) have emerged as powerful tools for investigating atomistic systems with high accuracy and a relatively low computational cost. However, a common and unaddressed challenge with many current neural network (NN) MLIP models is their limited ability to accurately predict the relative energies of systems containing isolated or nearly isolated atoms, which appear in various reactive processes. To address this limitation, we present a mathematical technique for modifying any existing atom-centered NN architecture to account for the energies of isolated atoms. The result produces a consistent prediction of the atomization energy (AE) of a system using minimal constraints on the model. Using this technique, we build a model architecture that we call hierarchically interacting particle neural network (HIP-NN)-AE, an AE-constrained version of the HIP-NN, as well as ANI-AE, the AE-constrained version of the accurate NN engine for molecular energies (ANI). Our results demonstrate AE consistency of AE-constrained models, which drastically improves the AE predictions for the models. We compare the AE-constrained approach to unconstrained models as well as models from the literature in other scenarios, such as bond dissociation energies, bond dissociation pathways, and extensibility tests. These results show that the constraints improve the model performance in some of these tasks and do not negatively affect the performance on any tasks. The AE constraint approach thus offers a robust solution to the challenges posed by isolated atoms in energy prediction tasks.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-04-29
DOI
https://doi.org/10.1021/acs.jcim.5c00341
Citations
4
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
2.07

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article

Including Physics-Informed Atomization Constraints in Neural Networks for Reactive Chemistry

Olexandr Isayev, Nicholas Lubbers, Shuhao Zhang, Richard A. Messerly et al.
4 citations
Journal of Chemical Information and Modeling
Machine Learning in Materials Science
2.07
article

Including Physics-Informed Atomization Constraints in Neural Networks for Reactive Chemistry

Olexandr Isayev, Nicholas Lubbers, Shuhao Zhang, Richard A. Messerly, Michael Chigaev
article en
4 citations

Abstract

Machine learning interatomic potentials (MLIPs) have emerged as powerful tools for investigating atomistic systems with high accuracy and a relatively low computational cost. However, a common and unaddressed challenge with many current neural network (NN) MLIP models is their limited ability to accurately predict the relative energies of systems containing isolated or nearly isolated atoms, which appear in various reactive processes. To address this limitation, we present a mathematical technique for modifying any existing atom-centered NN architecture to account for the energies of isolated atoms. The result produces a consistent prediction of the atomization energy (AE) of a system using minimal constraints on the model. Using this technique, we build a model architecture that we call hierarchically interacting particle neural network (HIP-NN)-AE, an AE-constrained version of the HIP-NN, as well as ANI-AE, the AE-constrained version of the accurate NN engine for molecular energies (ANI). Our results demonstrate AE consistency of AE-constrained models, which drastically improves the AE predictions for the models. We compare the AE-constrained approach to unconstrained models as well as models from the literature in other scenarios, such as bond dissociation energies, bond dissociation pathways, and extensibility tests. These results show that the constraints improve the model performance in some of these tasks and do not negatively affect the performance on any tasks. The AE constraint approach thus offers a robust solution to the challenges posed by isolated atoms in energy prediction tasks.

Journal of Chemical Information and ModelingVol. 65(9)
Oak Ridge Associated Universities (US), Oak Ridge National Laboratory (US), Los Alamos National Laboratory (US), Statistical Service (CY), Oak Ridge Leadership Computing Facility, Carnegie Mellon University (US), University of California, Berkeley (US)
Office of Naval Research, Laboratory Directed Research and Development
Openalex Percentile: Top 14%
Machine Learning in Materials Science
2.07
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