Mitochondrial Genomes of Six Snakes (Lycodon) and Implications for Their Phylogeny

The mitogenomes of these six species ranged from 17,143 to 17,298 bp in length and con-sisted of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), and 2 control regions. The nucleotide composition of the Colu-bridae mitogenomes was comparable with an A + T composition ranging from 52.1% to 58.8% except for the trnS1 and trnC. All the tRNAs could fold into a stable secondary structure. The Pi and Ka/Ks values suggested that atp8 was the fastest-evolving gene, while cox1 was the most conserved gene. Bayesian inference and maximum likelihood phylogenetic analyses yielded consistent results, with the six sequenced species clus-tering together with their congeneric species. These findings will provide valuable references for further research on the phylogeny of Colubridae.

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Publication Details

Journal
Genes
Published
2025-04-26
DOI
https://doi.org/10.3390/genes16050493
Primary Topic
Amphibian and Reptile Biology
Type
article
Field-Weighted Citation Impact
0.00

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article

Mitochondrial Genomes of Six Snakes (Lycodon) and Implications for Their Phylogeny

Ke Sun, Fei Zhu, Ailing Lu
Genes
Amphibian and Reptile Biology
article

Mitochondrial Genomes of Six Snakes (Lycodon) and Implications for Their Phylogeny

Ke Sun, Fei Zhu, Ailing Lu
article en

Abstract

The mitogenomes of these six species ranged from 17,143 to 17,298 bp in length and con-sisted of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), and 2 control regions. The nucleotide composition of the Colu-bridae mitogenomes was comparable with an A + T composition ranging from 52.1% to 58.8% except for the trnS1 and trnC. All the tRNAs could fold into a stable secondary structure. The Pi and Ka/Ks values suggested that atp8 was the fastest-evolving gene, while cox1 was the most conserved gene. Bayesian inference and maximum likelihood phylogenetic analyses yielded consistent results, with the six sequenced species clus-tering together with their congeneric species. These findings will provide valuable references for further research on the phylogeny of Colubridae.

GenesVol. 16(5)
Guizhou Normal University (CN)
Guizhou Normal University, Yibin University, Department of Education of Guizhou Province
Openalex Percentile: Top 91%
Amphibian and Reptile Biology
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Mitochondrial Genomes of Six Snakes (Lycodon) and Implications for Their Phylogeny — Ke Sun, Fei Zhu, et al. · Genes (2025) | TGRS Research Map | TGRS