Assessing accuracy and specificity of faecal source library for microbial source-tracking, using SourceTracker as case study
QIIME2 is available via https://qiime2.org/; SourceTracker v2.0.1 is available via https://github.com/caporaso-lab/sourcetracker2; Pipeline for LOO is available via https://github.com/MonashOWL/Bioinformatics-IlluminaMGI/tree/main/16S/LOO; Pipeline for sample size assessment is available via https://github.com/MonashOWL/Bioinformatics-IlluminaMGI/tree/main/16S/Source%20variability.
Authors
- Rebekah Henry (ORCID: https://orcid.org/0000-0001-6530-8557)
- Anna Lintern
- Timothy J Y Lim (ORCID: https://orcid.org/0000-0002-8798-4895)
- David McCarthy (ORCID: https://orcid.org/0000-0001-8845-6501)
- Yussi M Palacios Delgado
Institutions
- Monash Health (AU)
- Monash University (AU)
- University of Guelph (CA)
Publication Details
- Journal
- Bioinformatics Advances
- Published
- 2024-12-26
- DOI
- https://doi.org/10.1093/bioadv/vbaf103
- Citations
- 1
- Primary Topic
- Advanced Chemical Sensor Technologies
- Type
- article
- Field-Weighted Citation Impact
- 0.18
Funders
- Melbourne Water