Dynamics and Machine Learning Reveal the Link between Tripeptide Sequences and Evaporation-Driven Material Properties

Previous research showed that a peptide composed of three tyrosines (YYY) can turn into organic glass and cause strong adhesion between substrates via evaporation. However, the mechanisms of these processes remain unclear, and the exploration of applications of other peptide sequences is necessary. In this study, an optimized evaporation method was employed in molecular dynamics. It was found that YYY evaporation products possess abundant internal hydrogen bonds, which may facilitate the amorphous glass state formation. Moderate hydrophilicity of a peptide enhances molecular mobility and self-healing ability, while excessive hydrophilicity causes a water plasticizing effect. Stronger hydrophilicity also brings a larger curvature of evaporation products on polydimethylsiloxane (PDMS) substrate. A machine learning model was developed to predict the evaporation contact angle of peptide evaporation products and agrees well with the experiment. This research aims to improve understanding of peptide structure-function relationships and aid in designing custom organic optical devices based on peptide sequences.

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Publication Details

Journal
Nano Letters
Published
2025-04-28
DOI
https://doi.org/10.1021/acs.nanolett.5c01415
Citations
1
Primary Topic
Supramolecular Self-Assembly in Materials
Type
article
Field-Weighted Citation Impact
0.60

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article

Dynamics and Machine Learning Reveal the Link between Tripeptide Sequences and Evaporation-Driven Material Properties

Hecheng Wu, Xianglong Han, Dongfei Zhang, Hong Sheng Tan et al.
1 citations
Nano Letters
Supramolecular Self-Assembly in Materials
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article

Dynamics and Machine Learning Reveal the Link between Tripeptide Sequences and Evaporation-Driven Material Properties

Hecheng Wu, Xianglong Han, Dongfei Zhang, Hong Sheng Tan, Mingming Ding, Zhen Li, Ao Wang, Yang Liu, Xiaohan Jin, Wenkai Liu, Jiehua Li
article en
1 citations

Abstract

Previous research showed that a peptide composed of three tyrosines (YYY) can turn into organic glass and cause strong adhesion between substrates via evaporation. However, the mechanisms of these processes remain unclear, and the exploration of applications of other peptide sequences is necessary. In this study, an optimized evaporation method was employed in molecular dynamics. It was found that YYY evaporation products possess abundant internal hydrogen bonds, which may facilitate the amorphous glass state formation. Moderate hydrophilicity of a peptide enhances molecular mobility and self-healing ability, while excessive hydrophilicity causes a water plasticizing effect. Stronger hydrophilicity also brings a larger curvature of evaporation products on polydimethylsiloxane (PDMS) substrate. A machine learning model was developed to predict the evaporation contact angle of peptide evaporation products and agrees well with the experiment. This research aims to improve understanding of peptide structure-function relationships and aid in designing custom organic optical devices based on peptide sequences.

Nano LettersVol. 25(18)
Sichuan University (CN), Ingenierie des Materiaux polymeres (FR), Stomatology Hospital (CN), State Key Laboratory of Oral Diseases
National Natural Science Foundation of China
Openalex Percentile: Top 35%
Supramolecular Self-Assembly in Materials
0.60
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