Potential Roles of Soil Viruses in Karst Forest Soil Carbon and Nitrogen Cycles

Soil viruses, ubiquitous and abundant biological entities that are integral to microbial communities, exert pivotal impacts on ecosystem functionality, particularly within carbon (C) and nitrogen (N) cycles, through intricate interactions with bacteria, archaea, fungi, and other microbial taxa. While their contributions to soil ecosystem dynamics are increasingly elucidated, the specific roles of soil viruses in karst forest soil remain largely underexplored. Karst ecosystems (covering 15% of the global terrestrial surface) are characterized by unique geological formations, thin and patchy soil layers, high pH and Ca2+, and rapid hydrological dynamics, collectively fostering unique environmental conditions that may shape viral ecology and modulate C and N cycling. This perspective synthesizes existing knowledge of soil viral functions with the distinctive characteristics of karst forest soil, proposing potential mechanisms by which soil viruses could influence C and N cycling in such fragile ecosystems. Soil viruses regulate C and N cycles both directly and indirectly via their interactions with microbial hosts, mainly including shaping the microbial community structure, mediating horizontal gene transfer and microbial metabolism, increasing C and N availability and alleviating nutrient limitations, promoting C and N sequestration, and mitigating climate change. This work aims to bridge soil viral ecology and karst biogeochemical cycles, providing insights into sustainable forest stewardship and climate resilience. We delineate critical knowledge gaps and propose future perspectives, advocating for targeted metagenomic and long-term experimental studies into viral diversity, virus–host-environment interactions, and temporal dynamics. Specifically, we advocate the following research priorities to advance our understanding of soil viruses in karst forest ecosystems in future studies: (I) soil viral diversity, abundance, and activity: characterizing the diversity, abundance, and activity of soil viruses in karst forests using metagenomics and complementary molecular approaches; (II) virus–host interactions: investigating the dynamics between the viruses and key microbial taxa involved in C and N cycling; (III) biogeochemical impacts: quantifying the contributions of viral lysis and horizontal gene transfer to C and N fluxes within karst forest soil; and (IV) modeling the viral impacts on C and N cycles: developing integrative models that incorporate soil virus-mediated processes into existing karst forest soil biogeochemical frameworks at different temporal and spatial scales. Such efforts are essential to validate the hypothesized viral roles and underlying mechanisms, offering a foundation for nature-based solutions to facilitate C and N cycling and support ecological restoration in vulnerable karst regions amid global climate change.

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Publication Details

Journal
Forests
Published
2025-04-25
DOI
https://doi.org/10.3390/f16050735
Citations
4
Primary Topic
Plant Virus Research Studies
Type
article
Field-Weighted Citation Impact
7.00

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article

Potential Roles of Soil Viruses in Karst Forest Soil Carbon and Nitrogen Cycles

Hanqing Wu, Jun Ying Xiao, Tiangang Tang, Jie Zhao et al.
4 citations
Forests
Plant Virus Research Studies
7.00
article

Potential Roles of Soil Viruses in Karst Forest Soil Carbon and Nitrogen Cycles

Hanqing Wu, Jun Ying Xiao, Tiangang Tang, Jie Zhao, Pengpeng Duan, Peilei Hu, Wei Zhang, Qian Zhang, Kelin Wang, Nan Wu, Qiumei Ling, Hongsong Chen
article en
4 citations

Abstract

Soil viruses, ubiquitous and abundant biological entities that are integral to microbial communities, exert pivotal impacts on ecosystem functionality, particularly within carbon (C) and nitrogen (N) cycles, through intricate interactions with bacteria, archaea, fungi, and other microbial taxa. While their contributions to soil ecosystem dynamics are increasingly elucidated, the specific roles of soil viruses in karst forest soil remain largely underexplored. Karst ecosystems (covering 15% of the global terrestrial surface) are characterized by unique geological formations, thin and patchy soil layers, high pH and Ca2+, and rapid hydrological dynamics, collectively fostering unique environmental conditions that may shape viral ecology and modulate C and N cycling. This perspective synthesizes existing knowledge of soil viral functions with the distinctive characteristics of karst forest soil, proposing potential mechanisms by which soil viruses could influence C and N cycling in such fragile ecosystems. Soil viruses regulate C and N cycles both directly and indirectly via their interactions with microbial hosts, mainly including shaping the microbial community structure, mediating horizontal gene transfer and microbial metabolism, increasing C and N availability and alleviating nutrient limitations, promoting C and N sequestration, and mitigating climate change. This work aims to bridge soil viral ecology and karst biogeochemical cycles, providing insights into sustainable forest stewardship and climate resilience. We delineate critical knowledge gaps and propose future perspectives, advocating for targeted metagenomic and long-term experimental studies into viral diversity, virus–host-environment interactions, and temporal dynamics. Specifically, we advocate the following research priorities to advance our understanding of soil viruses in karst forest ecosystems in future studies: (I) soil viral diversity, abundance, and activity: characterizing the diversity, abundance, and activity of soil viruses in karst forests using metagenomics and complementary molecular approaches; (II) virus–host interactions: investigating the dynamics between the viruses and key microbial taxa involved in C and N cycling; (III) biogeochemical impacts: quantifying the contributions of viral lysis and horizontal gene transfer to C and N fluxes within karst forest soil; and (IV) modeling the viral impacts on C and N cycles: developing integrative models that incorporate soil virus-mediated processes into existing karst forest soil biogeochemical frameworks at different temporal and spatial scales. Such efforts are essential to validate the hypothesized viral roles and underlying mechanisms, offering a foundation for nature-based solutions to facilitate C and N cycling and support ecological restoration in vulnerable karst regions amid global climate change.

ForestsVol. 16(5)
Jilin University (CN), Chinese Academy of Sciences (CN), Institute of Subtropical Agriculture (CN), Zhanjiang Experimental Station (CN), University of Chinese Academy of Sciences (CN)
Natural Science Foundation of Guangxi Zhuang Autonomous Region, National Natural Science Foundation of China, Chinese Academy of Sciences, China Postdoctoral Science Foundation, Natural Science Foundation of Hainan Province
Openalex Percentile: Top 4%
Plant Virus Research Studies
7.00
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