Explainable differential diagnosis with dual-inference large language models
Automatic differential diagnosis (DDx) involves identifying potential conditions that could explain a patient's symptoms and its accurate interpretation is of substantial significance. While large language models (LLMs) have demonstrated remarkable diagnostic accuracy, their capability to generate high-quality DDx explanations remains underexplored, largely due to the absence of specialized evaluation datasets and the inherent challenges of complex reasoning in LLMs. Therefore, building a tailored dataset and developing novel methods to elicit LLMs for generating precise DDx explanations are worth exploring. We developed the first publicly available DDx dataset, comprising expert-derived explanations for 570 clinical notes, to evaluate DDx explanations. Meanwhile, we proposed a novel framework, Dual-Inf, that could effectively harness LLMs to generate high-quality DDx explanations. To the best of our knowledge, it is the first study to tailor LLMs for DDx explanation and comprehensively evaluate their explainability. Overall, our study bridges a critical gap in DDx explanation, enhancing clinical decision-making.
Authors
- Mingquan Lin (ORCID: https://orcid.org/0000-0003-0862-6588)
- James Zou (ORCID: https://orcid.org/0000-0001-8880-4764)
- Genevieve B. Melton (ORCID: https://orcid.org/0000-0001-5193-1663)
- Jiashuo Wang (ORCID: https://orcid.org/0009-0006-9116-3287)
- Sirui Ding (ORCID: https://orcid.org/0000-0001-5827-8214)
- Rui Zhang (ORCID: https://orcid.org/0000-0002-3636-4100)
- Canyu Chen (ORCID: https://orcid.org/0009-0005-7098-832X)
- Shuang Zhou (ORCID: https://orcid.org/0000-0001-5535-7988)
Institutions
- University of Chicago (US)
- Stanford University (US)
Publication Details
- Journal
- npj Health Systems
- Published
- 2025-04-24
- DOI
- https://doi.org/10.1038/s44401-025-00015-6
- Citations
- 12
- Primary Topic
- Topic Modeling
- Type
- article
- Field-Weighted Citation Impact
- 29.77
Funders
- University of Minnesota
- National Institutes of Health
- National Institute on Aging
- National Cancer Institute
- National Center for Complementary and Integrative Health