Explainable differential diagnosis with dual-inference large language models

Automatic differential diagnosis (DDx) involves identifying potential conditions that could explain a patient's symptoms and its accurate interpretation is of substantial significance. While large language models (LLMs) have demonstrated remarkable diagnostic accuracy, their capability to generate high-quality DDx explanations remains underexplored, largely due to the absence of specialized evaluation datasets and the inherent challenges of complex reasoning in LLMs. Therefore, building a tailored dataset and developing novel methods to elicit LLMs for generating precise DDx explanations are worth exploring. We developed the first publicly available DDx dataset, comprising expert-derived explanations for 570 clinical notes, to evaluate DDx explanations. Meanwhile, we proposed a novel framework, Dual-Inf, that could effectively harness LLMs to generate high-quality DDx explanations. To the best of our knowledge, it is the first study to tailor LLMs for DDx explanation and comprehensively evaluate their explainability. Overall, our study bridges a critical gap in DDx explanation, enhancing clinical decision-making.

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Publication Details

Journal
npj Health Systems
Published
2025-04-24
DOI
https://doi.org/10.1038/s44401-025-00015-6
Citations
12
Primary Topic
Topic Modeling
Type
article
Field-Weighted Citation Impact
29.77

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article

Explainable differential diagnosis with dual-inference large language models

Mingquan Lin, James Zou, Genevieve B. Melton, Jiashuo Wang et al.
12 citations
npj Health Systems
Topic Modeling
29.77
article

Explainable differential diagnosis with dual-inference large language models

Mingquan Lin, James Zou, Genevieve B. Melton, Jiashuo Wang, Sirui Ding, Rui Zhang, Canyu Chen, Shuang Zhou
article en
12 citations

Abstract

Automatic differential diagnosis (DDx) involves identifying potential conditions that could explain a patient's symptoms and its accurate interpretation is of substantial significance. While large language models (LLMs) have demonstrated remarkable diagnostic accuracy, their capability to generate high-quality DDx explanations remains underexplored, largely due to the absence of specialized evaluation datasets and the inherent challenges of complex reasoning in LLMs. Therefore, building a tailored dataset and developing novel methods to elicit LLMs for generating precise DDx explanations are worth exploring. We developed the first publicly available DDx dataset, comprising expert-derived explanations for 570 clinical notes, to evaluate DDx explanations. Meanwhile, we proposed a novel framework, Dual-Inf, that could effectively harness LLMs to generate high-quality DDx explanations. To the best of our knowledge, it is the first study to tailor LLMs for DDx explanation and comprehensively evaluate their explainability. Overall, our study bridges a critical gap in DDx explanation, enhancing clinical decision-making.

npj Health SystemsVol. 2(1)
University of Chicago (US), Stanford University (US)
University of Minnesota, National Institutes of Health, National Institute on Aging, National Cancer Institute, National Center for Complementary and Integrative Health
Peace, Justice and strong institutions
Openalex Percentile: Top 0%
Topic Modeling
29.77
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Explainable differential diagnosis with dual-inference large language models — Mingquan Lin, James Zou, et al. · npj Health Systems (2025) | TGRS Research Map | TGRS