The influence of the geroprotective cytokine on the transcriptome of young and senescent mesenchymal stem cells

To evaluate transcriptomic changes induced by the potential geroprotective factor GDF11, we performed RNA sequencing on four groups of samples: 'young' MSCs (MmC-/GDF11-) and senescent MSCs (MmC+/GDF11-) without the addition of GDF11, as well as 'young' (MmC-/GDF11+) and senescent MSCs (MmC+/GDF11+) with the addition of GDF11. After 10 days of incubation, indexed cDNA libraries for Illumina sequencing were prepared from the samples, and the resulting cDNA library mix was subjected to NovaSeq 6000 sequencing. This paper describes the collection of 16 RNA sequencing samples comprising 4 sets of MSCs. FASTQ files from Illumina sequencing are available in the NCBI Gene Expression Omnibus.

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Publication Details

Journal
BMC Research Notes
Published
2025-04-24
DOI
https://doi.org/10.1186/s13104-025-07262-8
Citations
1
Primary Topic
Mesenchymal stem cell research
Type
article
Field-Weighted Citation Impact
1.63

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article

The influence of the geroprotective cytokine on the transcriptome of young and senescent mesenchymal stem cells

Д. К. Матвеева, М. И. Ездакова, L. G. Kondratyeva, Marina Utkina et al.
1 citations
BMC Research Notes
Mesenchymal stem cell research
1.63
article

The influence of the geroprotective cytokine on the transcriptome of young and senescent mesenchymal stem cells

Д. К. Матвеева, М. И. Ездакова, L. G. Kondratyeva, Marina Utkina, Andrey Ratushnyy
article en
1 citations

Abstract

To evaluate transcriptomic changes induced by the potential geroprotective factor GDF11, we performed RNA sequencing on four groups of samples: 'young' MSCs (MmC-/GDF11-) and senescent MSCs (MmC+/GDF11-) without the addition of GDF11, as well as 'young' (MmC-/GDF11+) and senescent MSCs (MmC+/GDF11+) with the addition of GDF11. After 10 days of incubation, indexed cDNA libraries for Illumina sequencing were prepared from the samples, and the resulting cDNA library mix was subjected to NovaSeq 6000 sequencing. This paper describes the collection of 16 RNA sequencing samples comprising 4 sets of MSCs. FASTQ files from Illumina sequencing are available in the NCBI Gene Expression Omnibus.

BMC Research NotesVol. 18(1)
Institute of Biomedical Problems (RU), Research Centre for Medical Genetics (RU)
Russian Science Foundation
Openalex Percentile: Top 18%
Mesenchymal stem cell research
1.63
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