Non-monotonous Concentration Dependent Solvation of ATP Could Help to Rationalize Its Anomalous Impact on Various Biophysical Processes

Adenosine triphosphate (ATP), one of the biologically most important molecules, offers certain anomalous behavior during folding and liquid-liquid phase separation of proteins and RNAs. ATP can act as a "biological hydrotrope", i.e., it solubilizes hydrophobic proteins or other biomolecules. However, upon exceeding the physiological concentration range (2-10 mM), aggregation of proteins and RNAs is promoted, an effect that is not understood yet. Here we present a time-domain and frequency-domain Terahertz (THz) spectroscopic investigation to understand the solvation of ATP with varying concentration in the range of 2-15 mM. Both time and frequency domain studies of the solvation of adenosine (Adn), sodium triphosphate (TPP), and ATP elucidate that both the adenosine as well as the triphosphate moiety contribute to nearly equal propensity towards the solvation structure of ATP at low concentrations. However, at higher concentrations (>10 mM), the effect of the adenosine moiety dominates, which leads to a more structured solvation shell followed by slower relaxation dynamics. This is due to the triphosphate-driven ATP aggregation with a reduced amount of water-exposed triphosphate groups, as revealed by molecular dynamics simulations. These observations could lead to an understanding of the complex role of ATP in different biological systems.

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Publication Details

Journal
The Journal of Physical Chemistry Letters
Published
2025-04-23
DOI
https://doi.org/10.1021/acs.jpclett.5c00338
Citations
3
Primary Topic
ATP Synthase and ATPases Research
Type
article
Field-Weighted Citation Impact
2.42

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article

Non-monotonous Concentration Dependent Solvation of ATP Could Help to Rationalize Its Anomalous Impact on Various Biophysical Processes

Laurie Stevens, Simon Ebbinghaus, Marialore Sulpizi, Rajib Kumar Mitra et al.
3 citations
The Journal of Physical Chemistry Letters
ATP Synthase and ATPases Research
2.42
article

Non-monotonous Concentration Dependent Solvation of ATP Could Help to Rationalize Its Anomalous Impact on Various Biophysical Processes

Laurie Stevens, Simon Ebbinghaus, Marialore Sulpizi, Rajib Kumar Mitra, Alberta Ferrarini, Indrani Bhattacharya, A. K. Bera, Alexander Hautke, Emma Rossi, Tanushree Das, Aritra Marick
article en
3 citations

Abstract

Adenosine triphosphate (ATP), one of the biologically most important molecules, offers certain anomalous behavior during folding and liquid-liquid phase separation of proteins and RNAs. ATP can act as a "biological hydrotrope", i.e., it solubilizes hydrophobic proteins or other biomolecules. However, upon exceeding the physiological concentration range (2-10 mM), aggregation of proteins and RNAs is promoted, an effect that is not understood yet. Here we present a time-domain and frequency-domain Terahertz (THz) spectroscopic investigation to understand the solvation of ATP with varying concentration in the range of 2-15 mM. Both time and frequency domain studies of the solvation of adenosine (Adn), sodium triphosphate (TPP), and ATP elucidate that both the adenosine as well as the triphosphate moiety contribute to nearly equal propensity towards the solvation structure of ATP at low concentrations. However, at higher concentrations (>10 mM), the effect of the adenosine moiety dominates, which leads to a more structured solvation shell followed by slower relaxation dynamics. This is due to the triphosphate-driven ATP aggregation with a reduced amount of water-exposed triphosphate groups, as revealed by molecular dynamics simulations. These observations could lead to an understanding of the complex role of ATP in different biological systems.

The Journal of Physical Chemistry LettersVol. 16(17)
University of Padua (IT), S.N. Bose National Centre for Basic Sciences (IN), Ruhr University Bochum (DE)
University Grants Commission, Deutsche Forschungsgemeinschaft, Science and Engineering Research Board
Zero hunger
Openalex Percentile: Top 12%
ATP Synthase and ATPases Research
2.42
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