Genome-Wide Identification and Analysis of Chitinase GH18 Gene Family in Valsa mali

Chitinases are enzymes that catalyze the hydrolysis of chitin and play a significant biophysiological role in fungal growth, development, and pathogenesis. <i>Valsa mali</i> is a necrotrophic fungus that is a primary contributor to apple <i>Valsa</i> canker. Our study focused on the identification of chitinase gene families from <i>V. mali</i> and the analysis of their expression profiles during infection and nutritional growth. A phylogenetic analysis and conservation of catalytic domains were used to classify these genes into three classes, and their chromosome distribution was random. The qRT-PCR analysis identified five differentially expressed VmGH18 genes during infection and nutritional growth. GH18 chitinases use glutamate, whereas VmGH18-4 (VM1G_05900) and VmGH18-10 (VM1G_03597) use glutamine as the catalytic motif. To further test whether it can induce cell death in apple, the recombinant protein was produced in <i>E. coli</i>. It showed that the purified VmGH18-4 recombinant protein retained cell-death inducing activity, and it could also induce cell death in apple. But the enzyme activity shows that neither VmGH18-4 nor VmGH18-10 have chitinases enzyme activity. These results suggest that VmGH18-4 can elicit cell death in multiple plant species, while VmGH18-10 cannot.