Engineering coupled consortia-based biosensors for diagnostic

Synthetic multicellular systems have great potential for performing complex tasks, including multi-signal detection and computation through cell-to-cell communication. However, engineering these systems is challenging, requiring precise control over the cell concentrations of distinct members and coordination of their activity. Here, we develop a bacterial consortia-based biosensor for Heme and Lactate, wherein members are coupled through a global shared quorum-sensing signal that simultaneously controls the activity of the diverse biosensing strains. The multicellular system incorporates a gene circuit that computes the minimum between each biosensor's activity and the shared signal. We evaluate three consortia configurations: one where the shared signal is externally supplied, another directly produced via an inducible gene circuit, and a third generated through an incoherent feedforward loop (IFFL) gene circuit. Among these configurations, the IFFL system, which maintains the shared signal at low and stable levels over an extended period, demonstrates improved performance and robustness against perturbations in cell populations. Finally, we examine these coupled consortia to monitor Lactate and Heme in humanized fecal samples for diagnostics.

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Publication Details

Journal
Nature Communications
Published
2025-04-22
DOI
https://doi.org/10.1038/s41467-025-58996-9
Citations
3
Primary Topic
Gene Regulatory Network Analysis
Type
article
Field-Weighted Citation Impact
2.42

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article

Engineering coupled consortia-based biosensors for diagnostic

Naama Geva‐Zatorsky, Rongying Huang, Valeriia Kravchik, Ramez Daniel et al.
3 citations
Nature Communications
Gene Regulatory Network Analysis
2.42
article

Engineering coupled consortia-based biosensors for diagnostic

Naama Geva‐Zatorsky, Rongying Huang, Valeriia Kravchik, Ramez Daniel, Mouna Habib, Rawan Zaatry
article en
3 citations

Abstract

Synthetic multicellular systems have great potential for performing complex tasks, including multi-signal detection and computation through cell-to-cell communication. However, engineering these systems is challenging, requiring precise control over the cell concentrations of distinct members and coordination of their activity. Here, we develop a bacterial consortia-based biosensor for Heme and Lactate, wherein members are coupled through a global shared quorum-sensing signal that simultaneously controls the activity of the diverse biosensing strains. The multicellular system incorporates a gene circuit that computes the minimum between each biosensor's activity and the shared signal. We evaluate three consortia configurations: one where the shared signal is externally supplied, another directly produced via an inducible gene circuit, and a third generated through an incoherent feedforward loop (IFFL) gene circuit. Among these configurations, the IFFL system, which maintains the shared signal at low and stable levels over an extended period, demonstrates improved performance and robustness against perturbations in cell populations. Finally, we examine these coupled consortia to monitor Lactate and Heme in humanized fecal samples for diagnostics.

Nature CommunicationsVol. 16(1)
Canadian Institute for Advanced Research (CA), Technion – Israel Institute of Technology (IL), Rappaport Family Institute for Research in the Medical Sciences (IL)
Canadian Institute for Advanced Research, European Commission, Technion-Israel Institute of Technology
Affordable and clean energy
Openalex Percentile: Top 12%
Gene Regulatory Network Analysis
2.42
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Engineering coupled consortia-based biosensors for diagnostic — Naama Geva‐Zatorsky, Rongying Huang, et al. · Nature Communications (2025) | TGRS Research Map | TGRS