An updated comparison of microarray and RNA-seq for concentration response transcriptomic study: case studies with two cannabinoids, cannabichromene and cannabinol
Considering the relatively low cost, smaller data size, and better availability of software and public databases for data analysis and interpretation, microarray is still a viable method of choice for traditional transcriptomic applications such as mechanistic pathway identification and concentration response modeling.
Authors
- Xiugong Gao (ORCID: https://orcid.org/0000-0002-7755-8905)
- Estatira Sepehr (ORCID: https://orcid.org/0000-0003-3144-3421)
- Jeffrey J. Yourick
- Miranda R. Yourick (ORCID: https://orcid.org/0000-0002-4970-4725)
- Cory Vaught
- Kayla Campasino
- Yang Zhao (ORCID: https://orcid.org/0000-0003-3887-5323)
- Robert L. Sprando
Institutions
- United States Food and Drug Administration (US)
- Food and Drug Administration (TH)
Publication Details
- Journal
- BMC Genomics
- Published
- 2025-04-22
- DOI
- https://doi.org/10.1186/s12864-025-11548-3
- Citations
- 7
- Primary Topic
- Gene expression and cancer classification
- Type
- article
- Field-Weighted Citation Impact
- 5.64
Funders
- U.S. Food and Drug Administration
- National Institute of Environmental Health Sciences